RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 HIST1H2AJQ99878 128 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 H2AFJQ9BTM1 129 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 TIPINQ9BVW5 301 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 SIK2Q9H0K1 926 aa16.31■□□□□ 0.2
PTPN21-201ENST00000328736 PRDM5Q9NQX1 630 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-201ENST00000328736 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 PP2D1A8MPX8 630 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 SUPT3HO75486 399 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 GFPT1Q06210 699 aaPredicted RBP16.3■□□□□ 0.2
PTPN21-201ENST00000328736 USP17L6PQ6QN14 398 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 CEP70Q8NHQ1 597 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 TSR3Q9UJK0 312 aaKnown RBP16.3■□□□□ 0.2
PTPN21-201ENST00000328736 C5orf58C9J3I9 102 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 EIF3DO15371 548 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPN21-201ENST00000328736 LCP1P13796 627 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 RNF135Q8IUD6 432 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 KIRREL3Q8IZU9 778 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 ZNF668Q96K58 619 aaPredicted RBP16.3■□□□□ 0.2
PTPN21-201ENST00000328736 EHD2Q9NZN4 543 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.3■□□□□ 0.2
PTPN21-201ENST00000328736 ADRA2BP18089 450 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 HMOX2P30519 316 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 SULT1E1P49888 294 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 DRAP1Q14919 205 aaPredicted RBP16.3■□□□□ 0.2
PTPN21-201ENST00000328736 RAET1EQ8TD07 263 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 ZFYVE19Q96K21 471 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPN21-201ENST00000328736 LXNQ9BS40 222 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 FAM129AQ9BZQ8 928 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 MAD2L2Q9UI95 211 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 AGO2Q9UKV8 859 aaKnown RBP16.3■□□□□ 0.2
PTPN21-201ENST00000328736 TYK2P29597 1187 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 TPI1P60174 286 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 LRRC8EQ6NSJ5 796 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 FAM47EQ6ZV65 393 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 ZBED8Q8IZ13 594 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 ICA1LQ8NDH6 482 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 OR6J1Q8NGC5 347 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 KATNAL1Q9BW62 490 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 BCORL1Q5H9F3 1711 aa16.3■□□□□ 0.2
PTPN21-201ENST00000328736 IQCA1LA6NCM1 817 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 KRT87PA6NCN2 255 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 F5H423 210 aaPredicted RBP16.29■□□□□ 0.2
PTPN21-201ENST00000328736 AARS2Q5JTZ9 985 aaKnown RBP16.29■□□□□ 0.2
PTPN21-201ENST00000328736 PHF21AQ96BD5 680 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 RNF181Q9P0P0 153 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 STILQ15468 1287 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 TSC22D3Q99576 134 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 NARFQ9UHQ1 456 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 MAP3K4Q9Y6R4 1608 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 NCAPD2Q15021 1401 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 FTLP02792 175 aaPredicted RBP16.29■□□□□ 0.2
PTPN21-201ENST00000328736 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
PTPN21-201ENST00000328736 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 YIPF2Q9BWQ6 316 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 SYNDIG1Q9H7V2 258 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 TRPC7Q9HCX4 862 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 CD209Q9NNX6 404 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 POTEB3A0JP26 581 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 POTECB2RU33 542 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 FOXN1O15353 648 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 CHGBP05060 677 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 NEK2P51955 445 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 POTEBQ6S5H4 581 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 CATSPER1Q8NEC5 780 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 PPP1R2P1Q96PQ5 205 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 LY9Q9HBG7 655 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 MINPP1Q9UNW1 487 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 DOLKQ9UPQ8 538 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 NBPF9Q3BBW0 867 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 TSPAN17Q96FV3 270 aa16.29■□□□□ 0.2
PTPN21-201ENST00000328736 TGS1Q96RS0 853 aaKnown RBP16.29■□□□□ 0.2
PTPN21-201ENST00000328736 KIF28PB7ZC32 967 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 KBTBD13C9JR72 458 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 SLC1A1P43005 524 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 MTA3Q9BTC8 594 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 CDH6P55285 790 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
PTPN21-201ENST00000328736 PID1Q7Z2X4 250 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 BPIFA3Q9BQP9 254 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 FOXP2O15409 715 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 KRT16P08779 473 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 PPP2R2AP63151 447 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 NBPF10Q6P3W6 841 aaKnown RBP16.28■□□□□ 0.2
PTPN21-201ENST00000328736 B4GALNT2Q8NHY0 566 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 STXBP3O00186 592 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 USP11P51784 963 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 PDCLQ13371 301 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 TRIM60Q495X7 471 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 TRPM1Q7Z4N2 1603 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 TARSL2A2RTX5 802 aaKnown RBP16.28■□□□□ 0.2
PTPN21-201ENST00000328736 USP27XA6NNY8 438 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 NCK2O43639 380 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 PRKCQQ04759 706 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 INPP5AQ14642 412 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 RARS2Q5T160 578 aaKnown RBP16.28■□□□□ 0.2
PTPN21-201ENST00000328736 OTULINQ96BN8 352 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 SLC13A1Q9BZW2 595 aa16.28■□□□□ 0.2
PTPN21-201ENST00000328736 PRCPP42785 496 aa16.27■□□□□ 0.2
PTPN21-201ENST00000328736 SPP2Q13103 211 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms