RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SHC3Q92529 594 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 ZCCHC17Q9NP64 241 aaKnown RBP16.13■□□□□ 0.17
TPM3-205ENST00000328159 PCDHGC5Q9Y5F6 944 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 ZC3H11AO75152 810 aaKnown RBP eCLIP16.13■□□□□ 0.17
TPM3-205ENST00000328159 PPFIA4O75335 1185 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 TOM1L1O75674 476 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 PALMO75781 387 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 ZNF286BP0CG31 522 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 H2AFXP16104 143 aaPredicted RBP16.13■□□□□ 0.17
TPM3-205ENST00000328159 TNNI1P19237 187 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 USP8P40818 1118 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 IGBP1P78318 339 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 PRPF4BQ13523 1007 aaKnown RBP16.13■□□□□ 0.17
TPM3-205ENST00000328159 LMBRD2Q68DH5 695 aaPredicted RBP16.13■□□□□ 0.17
TPM3-205ENST00000328159 DNAAF5Q86Y56 855 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
TPM3-205ENST00000328159 ZBTB10Q96DT7 871 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 FAM84AQ96KN4 292 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 CAPZA3Q96KX2 299 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 ACO2Q99798 780 aaKnown RBP16.13■□□□□ 0.17
TPM3-205ENST00000328159 C16orf70Q9BSU1 422 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 ZHX1Q9UKY1 873 aaPredicted RBP16.13■□□□□ 0.17
TPM3-205ENST00000328159 HYOU1Q9Y4L1 999 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 COL1A2P08123 1366 aa16.13■□□□□ 0.17
TPM3-205ENST00000328159 ZSWIM8A7E2V4 1837 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 NCK2O43639 380 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 C4BPAP04003 597 aaKnown RBP16.12■□□□□ 0.17
TPM3-205ENST00000328159 GJB1P08034 283 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 HARSP12081 509 aaKnown RBP16.12■□□□□ 0.17
TPM3-205ENST00000328159 TAF1CQ15572 869 aaPredicted RBP16.12■□□□□ 0.17
TPM3-205ENST00000328159 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
TPM3-205ENST00000328159 ZACNQ401N2 412 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 MORN1Q5T089 497 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 IQSEC1Q6DN90 963 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 ZBTB33Q86T24 672 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 DOCK3Q8IZD9 2030 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 SLC20A1Q8WUM9 679 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 TATDN2Q93075 761 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 NLRP4Q96MN2 994 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 MMS19Q96T76 1030 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 CGRRF1Q99675 332 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 TCHPQ9BT92 498 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 EPC1Q9H2F5 836 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
TPM3-205ENST00000328159 PTPRJQ12913 1337 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 CNTNAP2Q9UHC6 1331 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 A0A0A6YYK5 440 aaPredicted RBP16.11■□□□□ 0.17
TPM3-205ENST00000328159 GRID2IPA4D2P6 1211 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 ZNF185O15231 689 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 MAGEB2O15479 319 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 HLA-DRAP01903 254 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 TCP1P17987 556 aaKnown RBP16.11■□□□□ 0.17
TPM3-205ENST00000328159 GALCP54803 685 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 PTENP60484 403 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 MAP2K5Q13163 448 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 OR6J1Q8NGC5 347 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 CAGE1Q8TC20 777 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 OSBPL9Q96SU4 736 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 PI4K2AQ9BTU6 479 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 TLR10Q9BXR5 811 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 FZD8Q9H461 694 aa16.11■□□□□ 0.17
TPM3-205ENST00000328159 SEPT11Q9NVA2 429 aaKnown RBP16.11■□□□□ 0.17
TPM3-205ENST00000328159 ACKR2O00590 384 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 ABLIM1O14639 778 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 FAM189A1O60320 539 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 SGPL1O95470 568 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 MMP3P08254 477 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 HOXD8P13378 290 aaPredicted RBP16.1■□□□□ 0.17
TPM3-205ENST00000328159 ZSCAN20P17040 1043 aaPredicted RBP16.1■□□□□ 0.17
TPM3-205ENST00000328159 PIK3CAP42336 1068 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 GCNT1Q02742 428 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 MCL1Q07820 350 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 BIRC3Q13489 604 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 SEZ6Q53EL9 994 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 TDRD10Q5VZ19 366 aaKnown RBP16.1■□□□□ 0.17
TPM3-205ENST00000328159 RGMBQ6NW40 437 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 NFRKBQ6P4R8 1299 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 ENOSF1Q7L5Y1 443 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 BRSK2Q8IWQ3 736 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 LINC01465Q8N7H1 131 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 ZNF668Q96K58 619 aaPredicted RBP16.1■□□□□ 0.17
TPM3-205ENST00000328159 FAM81BQ96LP2 452 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 C1orf112Q9NSG2 853 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 NOCTQ9UK39 431 aaKnown RBP16.1■□□□□ 0.17
TPM3-205ENST00000328159 NCANO14594 1321 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 TMCO5BA8MYB1 307 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 H3BRB1 525 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 INO80B-WBP1J3KQ70 363 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 OGTO15294 1046 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 CYP26A1O43174 497 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 ECM2O94769 699 aaPredicted RBP16.1■□□□□ 0.17
TPM3-205ENST00000328159 VNN1O95497 513 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 FTCDO95954 541 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 TMEM253P0C7T8 217 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 NOP2P46087 812 aaKnown RBP16.1■□□□□ 0.17
TPM3-205ENST00000328159 MBTD1Q05BQ5 628 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 TSHZ1Q6ZSZ6 1077 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 PALB2Q86YC2 1186 aa16.1■□□□□ 0.17
TPM3-205ENST00000328159 RPUSD2Q8IZ73 545 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms