RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CLTAP09496 248 aa14.6□□□□□ -0.07
DDX54-202ENST00000314045 INSRRP14616 1297 aa14.6□□□□□ -0.07
DDX54-202ENST00000314045 ZNF507Q8TCN5 953 aa14.6□□□□□ -0.07
DDX54-202ENST00000314045 PCDHB2Q9Y5E7 798 aa14.6□□□□□ -0.07
DDX54-202ENST00000314045 IL18RAPO95256 599 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 PON1P27169 355 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 SLC12A3P55017 1021 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 DR1Q01658 176 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 SCN4BQ8IWT1 228 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 GABPB2Q8TAK5 448 aaPredicted RBP14.59□□□□□ -0.07
DDX54-202ENST00000314045 GLT1D1Q96MS3 346 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 FRMPD4Q14CM0 1322 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 SYNGAP1Q96PV0 1343 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 BMP6P22004 513 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 PTGER2P43116 358 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 TRIP13Q15645 432 aaPredicted RBP14.59□□□□□ -0.07
DDX54-202ENST00000314045 C4orf32Q8N8J7 132 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 CCDC97Q96F63 343 aaPredicted RBP14.59□□□□□ -0.07
DDX54-202ENST00000314045 HAUS2Q9NVX0 235 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 DIS3Q9Y2L1 958 aaKnown RBP14.59□□□□□ -0.07
DDX54-202ENST00000314045 DOT1LQ8TEK3 1739 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 CSPG5O95196 566 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 PNMA6AP0CW24 399 aaPredicted RBP14.59□□□□□ -0.07
DDX54-202ENST00000314045 TSPY1Q01534 308 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 NAB2Q15742 525 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 KIZQ2M2Z5 673 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 P3H4Q92791 437 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 RNF25Q96BH1 459 aaPredicted RBP14.59□□□□□ -0.07
DDX54-202ENST00000314045 SAMD15Q9P1V8 674 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 PCSK1NQ9UHG2 260 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 TRAF3IP3Q9Y228 551 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 NDUFAB1O14561 156 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 WEE2P0C1S8 567 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 ADORA2BP29275 332 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 SDC4P31431 198 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 FIGNQ5HY92 759 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 ETNPPLQ8TBG4 499 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 URGCPQ8TCY9 931 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 HSPH1Q92598 858 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 CALR3Q96L12 384 aaKnown RBP14.59□□□□□ -0.07
DDX54-202ENST00000314045 MMTAG2Q9BU76 263 aaKnown RBP14.59□□□□□ -0.07
DDX54-202ENST00000314045 VTA1Q9NP79 307 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 ATP8A1Q9Y2Q0 1164 aa14.59□□□□□ -0.07
DDX54-202ENST00000314045 ATP9AO75110 1047 aa14.58□□□□□ -0.07
DDX54-202ENST00000314045 PLEKP08567 350 aaPredicted RBP14.58□□□□□ -0.07
DDX54-202ENST00000314045 NAA30Q147X3 362 aaPredicted RBP14.58□□□□□ -0.07
DDX54-202ENST00000314045 DARS2Q6PI48 645 aaKnown RBP14.58□□□□□ -0.07
DDX54-202ENST00000314045 SYN2Q92777 582 aaPredicted RBP14.58□□□□□ -0.07
DDX54-202ENST00000314045 RABEP2Q9H5N1 569 aa14.58□□□□□ -0.07
DDX54-202ENST00000314045 ASNSD1Q9NWL6 643 aa14.58□□□□□ -0.07
DDX54-202ENST00000314045 PLIN4Q96Q06 1357 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 UBA1P22314 1058 aaKnown RBP14.58□□□□□ -0.08
DDX54-202ENST00000314045 MYBPC2Q14324 1141 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 FAM102AQ5T9C2 384 aaPredicted RBP14.58□□□□□ -0.08
DDX54-202ENST00000314045 NOTUMQ6P988 496 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 RBM41Q96IZ5 413 aaKnown RBP14.58□□□□□ -0.08
DDX54-202ENST00000314045 TNIP3Q96KP6 325 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 ANAPC5Q9UJX4 755 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 MAD1L1Q9Y6D9 718 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 A6NNZ2 444 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 VTNP04004 478 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 MYBL1P10243 752 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 ELF1P32519 619 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 PHBP35232 272 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 CLCN6P51797 869 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 DHX9Q08211 1270 aaKnown RBP14.58□□□□□ -0.08
DDX54-202ENST00000314045 ITKQ08881 620 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 TUBB8Q3ZCM7 444 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 C1orf186Q6ZWK4 172 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 CCDC60Q8IWA6 550 aaPredicted RBP14.58□□□□□ -0.08
DDX54-202ENST00000314045 CPA5Q8WXQ8 436 aa14.58□□□□□ -0.08
DDX54-202ENST00000314045 KBTBD13C9JR72 458 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 FOXN3O00409 490 aaPredicted RBP14.57□□□□□ -0.08
DDX54-202ENST00000314045 CSDE1O75534 798 aaKnown RBP14.57□□□□□ -0.08
DDX54-202ENST00000314045 USP2O75604 605 aaPredicted RBP14.57□□□□□ -0.08
DDX54-202ENST00000314045 EPC2Q52LR7 807 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 CEP57Q86XR8 500 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 NCAPGQ9BPX3 1015 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 SENP7Q9BQF6 1050 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 NIF3L1Q9GZT8 377 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 TAF1DQ9H5J8 278 aaPredicted RBP14.57□□□□□ -0.08
DDX54-202ENST00000314045 TJP3O95049 919 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 NPTXRO95502 500 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 ZNF286BP0CG31 522 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 TREML2Q5T2D2 321 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 HHATQ5VTY9 493 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 GLIS3Q8NEA6 775 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 C18orf8Q96DM3 657 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 HSD17B14Q9BPX1 270 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 SLC12A6Q9UHW9 1150 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 RIPK3Q9Y572 518 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 A0A087WZ62 844 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 C17orf102A2RUQ5 167 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 SPDYE5A6NIY4 337 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 FZD9O00144 591 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 KLRC4O43908 158 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 PPFIA4O75335 1185 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 MAPTP10636 758 aaKnown RBP14.57□□□□□ -0.08
DDX54-202ENST00000314045 RNF180Q86T96 592 aa14.57□□□□□ -0.08
DDX54-202ENST00000314045 TRAPPC12Q8WVT3 735 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms