RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TTC7AQ9ULT0 858 aaPredicted RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 LRRC37A3O60309 1634 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 SF3B1O75533 1304 aaKnown RBP eCLIP4.25□□□□□ -1.73
USH2A-201ENST00000307340 COL14A1Q05707 1796 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 ROBO3Q96MS0 1386 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 SYCE1LA8MT33 242 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 KCNK3O14649 394 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 SH3BP5O60239 455 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 RECQLP46063 649 aaPredicted RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 DLGAP5Q15398 846 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 GCNAQ96QF7 691 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 OSBPL6Q9BZF3 934 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 EHD4Q9H223 541 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 SAR1AQ9NR31 198 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 SEPT10Q9P0V9 454 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 HOXD10P28358 340 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 AMPD2Q01433 879 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ART3Q13508 389 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 HEATR6Q6AI08 1181 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 KCTD6Q8NC69 237 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 CYLDQ9NQC7 956 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 PKD2L2Q9NZM6 624 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 TRPC5Q9UL62 973 aaPredicted RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 IQCA1LA6NCM1 817 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 USP17L12C9JPN9 530 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 USP17L21D6R901 530 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 CLDN3O15551 220 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 RASA4O43374 803 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 UFL1O94874 794 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 POLBP06746 335 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 CARSP49589 748 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 NUMA1Q14980 2115 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 CCDC153Q494R4 210 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 PI16Q6UXB8 463 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 LZTR1Q8N653 840 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 FBXL13Q8NEE6 735 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 CASP10Q92851 521 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 PBXIP1Q96AQ6 731 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 USTQ9Y2C2 406 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 V9GY48 417 aaPredicted RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 AFF2P51816 1311 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ITGB6P18564 788 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ADD1P35611 737 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 RGS2P41220 211 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 PHKA2P46019 1235 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 NSUN6Q8TEA1 469 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 FAM210AQ96ND0 272 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 VPS16Q9H269 839 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ST7Q9NRC1 585 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 STX18Q9P2W9 335 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 GOLGA4Q13439 2230 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 SPAG7O75391 227 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 RAD51Q06609 339 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 NUP98P52948 1817 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 KPNA5O15131 536 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 PCSK1P29120 753 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 STX17P56962 302 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 CNGA3Q16281 694 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ABCB5Q2M3G0 1257 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 PPP1R15BQ5SWA1 713 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ALKBH5Q6P6C2 394 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 HELQQ8TDG4 1101 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 THRSPQ92748 146 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 VAT1LQ9HCJ6 419 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 CDKL3Q8IVW4 592 aaPredicted RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 SEPT8Q92599 483 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 SENP7Q9BQF6 1050 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 RAD18Q9NS91 495 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 RSL24D1Q9UHA3 163 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 TRDMT1O14717 391 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 ADCY3O60266 1144 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 DNAJC24Q6P3W2 148 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 THNSL1Q8IYQ7 743 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 KCNB2Q92953 911 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 TSC22D3Q99576 134 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 BUB1O43683 1085 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 SLC25A27O95847 323 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 GCKP35557 465 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 HIC1Q14526 733 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 DUOXA2Q1HG44 320 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 DNERQ8NFT8 737 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 TUBE1Q9UJT0 475 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 TOGARAM1Q9Y4F4 1720 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 SPDYE4A6NLX3 237 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 B4E1Z4 1266 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ZNF197O14709 1029 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 TADA3O75528 432 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ESRRAP11474 423 aaPredicted RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 LRMPQ12912 555 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 GK3PQ14409 553 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 GSTA3Q16772 222 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 CWF19L2Q2TBE0 894 aaKnown RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 C11orf63Q6NUN7 778 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 SLC22A9Q8IVM8 553 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ACMSDQ8TDX5 336 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 SCFD2Q8WU76 684 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ZBTB18Q99592 522 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 OATP04181 439 aa4.24□□□□□ -1.73
USH2A-201ENST00000307340 ABCB1P08183 1280 aaPredicted RBP4.24□□□□□ -1.73
USH2A-201ENST00000307340 PTK6Q13882 451 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms