RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 GPBP1Q86WP2 473 aa29.03■■■□□ 2.24
CDKN2A-201ENST00000304494 RAD54LQ92698 747 aa29.03■■■□□ 2.24
CDKN2A-201ENST00000304494 C1QTNF1Q9BXJ1 281 aa29.03■■■□□ 2.24
CDKN2A-201ENST00000304494 DZANK1Q9NVP4 752 aa29.03■■■□□ 2.24
CDKN2A-201ENST00000304494 FBXO2Q9UK22 296 aaPredicted RBP29.03■■■□□ 2.24
CDKN2A-201ENST00000304494 PTGESO14684 152 aa29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 HSP90AA1P07900 732 aaKnown RBP29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 MARCKSP29966 332 aaPredicted RBP29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 SYCE2Q6PIF2 218 aa29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 RNF168Q8IYW5 571 aaPredicted RBP29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 TMEM161BQ8NDZ6 487 aa29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 SUSD6Q92537 303 aa29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 S1PR5Q9H228 398 aa29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 PTPRHQ9HD43 1115 aa29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 BLOC1S4Q9NUP1 217 aa29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 MORC2Q9Y6X9 1032 aaPredicted RBP29.02■■■□□ 2.24
CDKN2A-201ENST00000304494 C5orf42Q9H799 3197 aa29.01■■■□□ 2.24
CDKN2A-201ENST00000304494 NPHP3-ACAD11A0A0J9YXS1 232 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 EFEMP2O95967 443 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 PDIA4P13667 645 aaKnown RBP29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 SCP2P22307 547 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 TXLNAP40222 546 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 GRM5P41594 1212 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 GLUD2P49448 558 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 YARSP54577 528 aaKnown RBP29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 CEBPZQ03701 1054 aaKnown RBP29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 DHX8Q14562 1220 aaKnown RBP29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 HSP90AA2PQ14568 343 aaPredicted RBP29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 TCHPQ9BT92 498 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 CCDC94Q9BW85 323 aaPredicted RBP29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 TARS2Q9BW92 718 aaKnown RBP29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 CDT1Q9H211 546 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 TOPORSQ9NS56 1045 aaPredicted RBP29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 CCDC39Q9UFE4 941 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 ADAM28Q9UKQ2 775 aa29.01■■■□□ 2.23
CDKN2A-201ENST00000304494 LILRB3O75022 631 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 KRT18P05783 430 aaKnown RBP29■■■□□ 2.23
CDKN2A-201ENST00000304494 MAPTP10636 758 aaKnown RBP29■■■□□ 2.23
CDKN2A-201ENST00000304494 MCF2P10911 925 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 KLRC2P26717 231 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 CACNB1Q02641 598 aaPredicted RBP29■■■□□ 2.23
CDKN2A-201ENST00000304494 ITIH3Q06033 890 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 MCM6Q14566 821 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 KIAA1841Q6NSI8 718 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 MPZL3Q6UWV2 235 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 SLC22A17Q8WUG5 538 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 LARP4BQ92615 738 aaKnown RBP29■■■□□ 2.23
CDKN2A-201ENST00000304494 EPSTI1Q96J88 318 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 KLHL5Q96PQ7 755 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 REEP2Q9BRK0 252 aa29■■■□□ 2.23
CDKN2A-201ENST00000304494 PHF7Q9BWX1 381 aaPredicted RBP29■■■□□ 2.23
CDKN2A-201ENST00000304494 F8W810 466 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 PI4K2BG5E9Z4 385 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 C2CD2LO14523 706 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 TADA2AO75478 443 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 CNPP09543 421 aaKnown RBP28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 PROZP22891 400 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 DDIT3P35638 169 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 CBX2Q14781 532 aaPredicted RBP28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 CES5AQ6NT32 575 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 FUT10Q6P4F1 479 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 TAS1R1Q7RTX1 841 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 LRRC15Q8TF66 581 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 KHSRPQ92945 711 aaKnown RBP eCLIP28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 USP28Q96RU2 1077 aa28.99■■■□□ 2.23
CDKN2A-201ENST00000304494 CASTOR2A6NHX0 329 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 TOM1L1O75674 476 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 FAM13AO94988 1023 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 BRD1O95696 1058 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 ALADP13716 330 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 NCKAP1LP55160 1127 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 DSG1Q02413 1049 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 SLC39A14Q15043 492 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 USP41Q3LFD5 358 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 SPECC1Q5M775 1068 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 ZPBP2Q6X784 338 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 ZBTB33Q86T24 672 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 APOL5Q9BWW9 433 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 ADAM7Q9H2U9 754 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 EPHX3Q9H6B9 360 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 PARVGQ9HBI0 331 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 CHST7Q9NS84 486 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 STK17AQ9UEE5 414 aa28.98■■■□□ 2.23
CDKN2A-201ENST00000304494 SF3B1O75533 1304 aaKnown RBP eCLIP28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 ADH1AP07327 375 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 EPCAMP16422 314 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 CLCN4P51793 760 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 ZNF131P52739 623 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 NAB2Q15742 525 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 KIAA0319Q5VV43 1072 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 GPR65Q8IYL9 337 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 MYCT1Q8N699 235 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 KRI1Q8N9T8 703 aaKnown RBP28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 RABGGTAQ92696 567 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 KCNN1Q92952 543 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 PAAF1Q9BRP4 392 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 GPR62Q9BZJ7 368 aa28.97■■■□□ 2.23
CDKN2A-201ENST00000304494 ABLIM1O14639 778 aa28.96■■■□□ 2.23
CDKN2A-201ENST00000304494 TBCAO75347 108 aaKnown RBP28.96■■■□□ 2.23
CDKN2A-201ENST00000304494 USP49Q70CQ1 688 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms