RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 RDH13Q8NBN7 331 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 GOLGA5Q8TBA6 731 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 SEPT8Q92599 483 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 MFSD14AQ96MC6 490 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 FAM213AQ9BRX8 229 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 MSTO1Q9BUK6 570 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 SNTG2Q9NY99 539 aa10.35□□□□□ -0.75
RFX3-201ENST00000302303 TTC26A0AVF1 554 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 AP5Z1O43299 807 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 STAG3L1P0CL83 205 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 ATP1A3P13637 1013 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 OSTNP61366 133 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 DLG4P78352 724 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 RASIP1Q5U651 963 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 TWF2Q6IBS0 349 aaKnown RBP10.34□□□□□ -0.75
RFX3-201ENST00000302303 ZNF365Q70YC5 407 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 SLC24A5Q71RS6 500 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 GPD1LQ8N335 351 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 APBB2Q92870 758 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 LPPQ93052 612 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 FAM84AQ96KN4 292 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 CEP63Q96MT8 703 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 ZMAT2Q96NC0 199 aaKnown RBP10.34□□□□□ -0.75
RFX3-201ENST00000302303 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.34□□□□□ -0.75
RFX3-201ENST00000302303 TCHPQ9BT92 498 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 FTHL17Q9BXU8 183 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 MIOSQ9NXC5 875 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 COL4A6Q14031 1691 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 PTPRJQ12913 1337 aa10.34□□□□□ -0.75
RFX3-201ENST00000302303 LRRC10BA6NIK2 292 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 KIAA0391O15091 583 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 CETN3O15182 167 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 MAPK13O15264 365 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 CAVIN2O95810 425 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 HARSP12081 509 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 ZSCAN20P17040 1043 aaPredicted RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 AKAP5P24588 427 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 CLDN10P78369 228 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 POU5F1Q01860 360 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 FPGSQ05932 587 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 C1QBPQ07021 282 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 CYP24A1Q07973 514 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 NCBP1Q09161 790 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 NAB2Q15742 525 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 ZBTB6Q15916 424 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 SNRNP35Q16560 246 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 DCAF4L1Q3SXM0 396 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 HSP90AA4PQ58FG1 418 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 TRIM59Q8IWR1 403 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 RNF214Q8ND24 703 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 PARD3BQ8TEW8 1205 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 ZNF516Q92618 1163 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 TSG101Q99816 390 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 MKNK1Q9BUB5 465 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 THAP9Q9H5L6 903 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 CXXC1Q9P0U4 656 aaPredicted RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 TTC3P53804 2025 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 MICAL3Q7RTP6 2002 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 ABHD14A-ACY1A0A1B0GW23 586 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 LACTBL1A8MY62 500 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 PTGESO14684 152 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 INPPL1O15357 1258 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 EXOC3O60645 756 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 RECQL4O94761 1208 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 LDHAP00338 332 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 PFKMP08237 780 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 CLTAP09496 248 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 CXCL8P10145 99 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 RPL13P26373 211 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 PSMC2P35998 433 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 DEFB103AP81534 67 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 PPIGQ13427 754 aaKnown RBP eCLIP10.33□□□□□ -0.76
RFX3-201ENST00000302303 IKBKEQ14164 716 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 MIIPQ5JXC2 388 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 CLLU1OSQ5K130 101 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 CEP135Q66GS9 1140 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 OTOP2Q7RTS6 562 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 TMCO2Q7Z6W1 182 aaPredicted RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 BRSK2Q8IWQ3 736 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 RPUSD2Q8IZ73 545 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 CXorf38Q8TB03 319 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 POP1Q99575 1024 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 GDF15Q99988 308 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 ADPGKQ9BRR6 497 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 NAT10Q9H0A0 1025 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 ELAC1Q9H777 363 aaKnown RBP10.33□□□□□ -0.76
RFX3-201ENST00000302303 KIAA1586Q9HCI6 787 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 PDE11AQ9HCR9 933 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 C1orf112Q9NSG2 853 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 PLAGL2Q9UPG8 496 aa10.33□□□□□ -0.76
RFX3-201ENST00000302303 PTPRSQ13332 1948 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 FSD2A1L4K1 749 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 ZNF233A6NK53 670 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 LRRIQ3A6PVS8 624 aaPredicted RBP10.32□□□□□ -0.76
RFX3-201ENST00000302303 SLC16A3O15427 465 aaKnown RBP10.32□□□□□ -0.76
RFX3-201ENST00000302303 OFD1O75665 1012 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 EOMESO95936 686 aa10.32□□□□□ -0.76
RFX3-201ENST00000302303 FGBP02675 491 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms