RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 TTMPQ5BVD1 217 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 SCARA3Q6AZY7 606 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 TMEM161BQ8NDZ6 487 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 AENQ8WTP8 325 aaKnown RBP10.85□□□□□ -0.67
FOXN4-201ENST00000299162 CPA5Q8WXQ8 436 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 FNBP1Q96RU3 617 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 PCDHB18PQ96TA0 734 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 TEX13BQ9BXU2 312 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 TRIM7Q9C029 511 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 KLC4Q9NSK0 619 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 ETAA1Q9NY74 926 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 TUBBP07437 444 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 FLT3P36888 993 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 VPS41P49754 854 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 EPHB4P54760 987 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 TGFB2P61812 414 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 C1orf220Q5T0J3 134 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 B4GALNT4Q76KP1 1039 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 OTUD6AQ7L8S5 288 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 LRRC57Q8N9N7 239 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 ZNF653Q96CK0 615 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 KREMEN1Q96MU8 473 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 HAUS2Q9NVX0 235 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 CYP39A1Q9NYL5 469 aa10.85□□□□□ -0.67
FOXN4-201ENST00000299162 MEFVO15553 781 aaPredicted RBP10.84□□□□□ -0.67
FOXN4-201ENST00000299162 PPP1R37O75864 691 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 GJB1P08034 283 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 MYBL1P10243 752 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 JAK3P52333 1124 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 DRP2Q13474 957 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 NEDD9Q14511 834 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 NT5DC3Q86UY8 548 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 TMEM130Q8N3G9 435 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 LRRC71Q8N4P6 559 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 ZNF483Q8TF39 744 aaPredicted RBP10.84□□□□□ -0.67
FOXN4-201ENST00000299162 LMBR1Q8WVP7 490 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 RFFLQ8WZ73 363 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 ALG3Q92685 438 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 ATP6V0A1Q93050 837 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 CLMNQ96JQ2 1002 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 IFT74Q96LB3 600 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 MKNK1Q9BUB5 465 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 TARS2Q9BW92 718 aaKnown RBP10.84□□□□□ -0.67
FOXN4-201ENST00000299162 ACAD9Q9H845 621 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 DNAJC17Q9NVM6 304 aaKnown RBP10.84□□□□□ -0.67
FOXN4-201ENST00000299162 PFASO15067 1338 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 GJB6O95452 261 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 PRLRP16471 622 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 PRKCIP41743 596 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 KCNJ1P48048 391 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 IGBP1P78318 339 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 PAK2Q13177 524 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 FOXR2Q6PJQ5 311 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 SV2AQ7L0J3 742 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 PNMA8AQ86V59 439 aaPredicted RBP10.84□□□□□ -0.67
FOXN4-201ENST00000299162 CCDC25Q86WR0 208 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 C4orf19Q8IY42 314 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 SYNPO2Q9UMS6 1093 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 ALG6Q9Y672 507 aa10.84□□□□□ -0.67
FOXN4-201ENST00000299162 TLDC2A0PJX2 215 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 SPDYE16A6NNV3 312 aaPredicted RBP10.83□□□□□ -0.67
FOXN4-201ENST00000299162 SLC26A4O43511 780 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 PLA2G6O60733 806 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 PSAPP07602 524 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 DSG3P32926 999 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 WNT7BP56706 349 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 ZNF280AP59817 542 aaPredicted RBP10.83□□□□□ -0.67
FOXN4-201ENST00000299162 TRIP13Q15645 432 aaPredicted RBP10.83□□□□□ -0.67
FOXN4-201ENST00000299162 LY6KQ17RY6 165 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 SLC39A4Q6P5W5 647 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 NEK9Q8TD19 979 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.83□□□□□ -0.67
FOXN4-201ENST00000299162 TACO1Q9BSH4 297 aaKnown RBP10.83□□□□□ -0.67
FOXN4-201ENST00000299162 CCDC113Q9H0I3 377 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 NEUROG2Q9H2A3 272 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 ERVK-5Q9HDB9 667 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 KCND2Q9NZV8 630 aa10.83□□□□□ -0.67
FOXN4-201ENST00000299162 FAM163BP0C2L3 166 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 CD58P19256 250 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 TMOD1P28289 359 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 LSP1P33241 339 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 AARSP49588 968 aaKnown RBP eCLIP10.83□□□□□ -0.68
FOXN4-201ENST00000299162 NLRP11P59045 1033 aaKnown RBP10.83□□□□□ -0.68
FOXN4-201ENST00000299162 VGLL4Q14135 290 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 DPH6Q7L8W6 267 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 LMO3Q8TAP4 145 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 DEPTORQ8TB45 409 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 SLC16A10Q8TF71 515 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 TRAPPC12Q8WVT3 735 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 NT5C1BQ96P26 610 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 XPNPEP1Q9NQW7 623 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 CYP26B1Q9NR63 512 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 ATP8A1Q9Y2Q0 1164 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 SNX24Q9Y343 169 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 GRIN2DO15399 1336 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 GOLGA6L10A6NI86 522 aa10.83□□□□□ -0.68
FOXN4-201ENST00000299162 KCNA2P16389 499 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms