RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 KCNN1Q92952 543 aa23.1■■□□□ 1.29
SOX17-201ENST00000297316 NOX5Q96PH1 765 aa23.1■■□□□ 1.29
SOX17-201ENST00000297316 GJD2Q9UKL4 321 aa23.1■■□□□ 1.29
SOX17-201ENST00000297316 DNAH12Q6ZR08 3092 aa23.1■■□□□ 1.29
SOX17-201ENST00000297316 CSDE1O75534 798 aaKnown RBP23.1■■□□□ 1.29
SOX17-201ENST00000297316 MXD4Q14582 209 aaPredicted RBP23.1■■□□□ 1.29
SOX17-201ENST00000297316 CDCA2Q69YH5 1023 aaPredicted RBP23.1■■□□□ 1.29
SOX17-201ENST00000297316 NFRKBQ6P4R8 1299 aa23.1■■□□□ 1.29
SOX17-201ENST00000297316 COG1Q8WTW3 980 aa23.1■■□□□ 1.29
SOX17-201ENST00000297316 CCDC102AQ96A19 550 aa23.1■■□□□ 1.29
SOX17-201ENST00000297316 ALS2CR12Q96Q35 445 aa23.1■■□□□ 1.29
SOX17-201ENST00000297316 MGAMO43451 1857 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 EXTL3O43909 919 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 ZNF865P0CJ78 1059 aaPredicted RBP23.09■■□□□ 1.29
SOX17-201ENST00000297316 NAP1L1P55209 391 aaKnown RBP23.09■■□□□ 1.29
SOX17-201ENST00000297316 MCCD1P59942 119 aaPredicted RBP23.09■■□□□ 1.29
SOX17-201ENST00000297316 ALKBH5Q6P6C2 394 aaKnown RBP23.09■■□□□ 1.29
SOX17-201ENST00000297316 RNF10Q8N5U6 811 aaKnown RBP23.09■■□□□ 1.29
SOX17-201ENST00000297316 KAT5Q92993 513 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 PNKPQ96T60 521 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 PSMB7Q99436 277 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 ARHGAP39Q9C0H5 1083 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 MINDY3Q9H8M7 445 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 ZNF233A6NK53 670 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 TNPO2O14787 897 aaKnown RBP23.09■■□□□ 1.29
SOX17-201ENST00000297316 GAS2O43903 313 aaKnown RBP23.09■■□□□ 1.29
SOX17-201ENST00000297316 SEC31AO94979 1220 aaKnown RBP23.09■■□□□ 1.29
SOX17-201ENST00000297316 HOXC6P09630 235 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 ABCD1P33897 745 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 ZBTB33Q86T24 672 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 SYT11Q9BT88 431 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 MSTO1Q9BUK6 570 aa23.09■■□□□ 1.29
SOX17-201ENST00000297316 FOXN3O00409 490 aaPredicted RBP23.08■■□□□ 1.29
SOX17-201ENST00000297316 PALMO75781 387 aa23.08■■□□□ 1.29
SOX17-201ENST00000297316 RHOXF2BP0C7M4 288 aa23.08■■□□□ 1.29
SOX17-201ENST00000297316 SREBF2Q12772 1141 aa23.08■■□□□ 1.29
SOX17-201ENST00000297316 ZNF484Q5JVG2 852 aa23.08■■□□□ 1.29
SOX17-201ENST00000297316 CDR2LQ86X02 465 aaPredicted RBP23.08■■□□□ 1.29
SOX17-201ENST00000297316 TXLNBQ8N3L3 684 aa23.08■■□□□ 1.29
SOX17-201ENST00000297316 ZNF516Q92618 1163 aa23.08■■□□□ 1.29
SOX17-201ENST00000297316 RHOXF2Q9BQY4 288 aa23.08■■□□□ 1.29
SOX17-201ENST00000297316 TLR10Q9BXR5 811 aa23.08■■□□□ 1.29
SOX17-201ENST00000297316 PDE11AQ9HCR9 933 aa23.08■■□□□ 1.29
SOX17-201ENST00000297316 UBE2TQ9NPD8 197 aaPredicted RBP23.08■■□□□ 1.29
SOX17-201ENST00000297316 LUC7LQ9NQ29 371 aaKnown RBP23.08■■□□□ 1.29
SOX17-201ENST00000297316 A0A0B4J269 797 aa23.08■■□□□ 1.28
SOX17-201ENST00000297316 FAM170AA1A519 330 aa23.08■■□□□ 1.28
SOX17-201ENST00000297316 N4BP1O75113 896 aaKnown RBP23.08■■□□□ 1.28
SOX17-201ENST00000297316 PRKCBP05771 671 aa23.08■■□□□ 1.28
SOX17-201ENST00000297316 IQCF3P0C7M6 154 aa23.08■■□□□ 1.28
SOX17-201ENST00000297316 MSL3Q8N5Y2 521 aaKnown RBP23.08■■□□□ 1.28
SOX17-201ENST00000297316 SLC30A5Q8TAD4 765 aa23.08■■□□□ 1.28
SOX17-201ENST00000297316 TMC2Q8TDI7 906 aa23.08■■□□□ 1.28
SOX17-201ENST00000297316 TAS1R2Q8TE23 839 aa23.08■■□□□ 1.28
SOX17-201ENST00000297316 GNEQ9Y223 722 aaKnown RBP23.08■■□□□ 1.28
SOX17-201ENST00000297316 PTPRJQ12913 1337 aa23.08■■□□□ 1.28
SOX17-201ENST00000297316 TMEM88BA6NKF7 163 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 P4HA2O15460 535 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 B4GALT5O43286 388 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 CXCR5P32302 372 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 SV2AQ7L0J3 742 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 CREG2Q8IUH2 290 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 GLYCTKQ8IVS8 523 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 EXOC8Q8IYI6 725 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 JPH2Q9BR39 696 aaPredicted RBP23.07■■□□□ 1.28
SOX17-201ENST00000297316 VTNP04004 478 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 HOXD8P13378 290 aaPredicted RBP23.07■■□□□ 1.28
SOX17-201ENST00000297316 TM4SF4P48230 202 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 EFNA5P52803 228 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 DGKDQ16760 1214 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 KRT39Q6A163 491 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 ZBTB8OSQ8IWT0 167 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 SMC1BQ8NDV3 1235 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 U2AF1L4Q8WU68 220 aaKnown RBP23.07■■□□□ 1.28
SOX17-201ENST00000297316 SMARCAL1Q9NZC9 954 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 EHD2Q9NZN4 543 aa23.07■■□□□ 1.28
SOX17-201ENST00000297316 GRID2IPA4D2P6 1211 aa23.06■■□□□ 1.28
SOX17-201ENST00000297316 INO80B-WBP1J3KQ70 363 aa23.06■■□□□ 1.28
SOX17-201ENST00000297316 FTCDO95954 541 aa23.06■■□□□ 1.28
SOX17-201ENST00000297316 TNFSF9P41273 254 aa23.06■■□□□ 1.28
SOX17-201ENST00000297316 CETN1Q12798 172 aa23.06■■□□□ 1.28
SOX17-201ENST00000297316 BMS1Q14692 1282 aaKnown RBP23.06■■□□□ 1.28
SOX17-201ENST00000297316 MSANTD4Q8NCY6 345 aa23.06■■□□□ 1.28
SOX17-201ENST00000297316 OSBPL9Q96SU4 736 aa23.06■■□□□ 1.28
SOX17-201ENST00000297316 ACO2Q99798 780 aaKnown RBP23.06■■□□□ 1.28
SOX17-201ENST00000297316 INO80BQ9C086 356 aaPredicted RBP23.06■■□□□ 1.28
SOX17-201ENST00000297316 TMEM8AQ9HCN3 771 aa23.06■■□□□ 1.28
SOX17-201ENST00000297316 PCDHGC5Q9Y5F6 944 aa23.06■■□□□ 1.28
SOX17-201ENST00000297316 ZRANB2O95218 330 aaKnown RBP eCLIP23.05■■□□□ 1.28
SOX17-201ENST00000297316 RGS2P41220 211 aa23.05■■□□□ 1.28
SOX17-201ENST00000297316 MAPK6Q16659 721 aa23.05■■□□□ 1.28
SOX17-201ENST00000297316 MARCH8Q5T0T0 291 aa23.05■■□□□ 1.28
SOX17-201ENST00000297316 SLFN12LQ6IEE8 588 aa23.05■■□□□ 1.28
SOX17-201ENST00000297316 PALB2Q86YC2 1186 aa23.05■■□□□ 1.28
SOX17-201ENST00000297316 LINC01465Q8N7H1 131 aa23.05■■□□□ 1.28
SOX17-201ENST00000297316 TCHPQ9BT92 498 aa23.05■■□□□ 1.28
SOX17-201ENST00000297316 MRPL4Q9BYD3 311 aaKnown RBP23.05■■□□□ 1.28
SOX17-201ENST00000297316 RNF216Q9NWF9 866 aaPredicted RBP23.05■■□□□ 1.28
SOX17-201ENST00000297316 CLDN3O15551 220 aa23.05■■□□□ 1.28
SOX17-201ENST00000297316 ANXA13P27216 316 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms