RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 EPAS1Q99814 870 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 TTC26A0AVF1 554 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 SLC26A2P50443 739 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 HSD17B4P51659 736 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 TMED2Q15363 201 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 DCAF4L1Q3SXM0 396 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 WHAMMQ8TF30 809 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 IDI2Q9BXS1 227 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 BAG5Q9UL15 447 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 KIF3CO14782 793 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 SERPINB6P35237 376 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 LMNTD2Q8IXW0 634 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 HPS3Q969F9 1004 aa18.81■□□□□ 0.6
CDC42EP3-201ENST00000295324 CYP26A1O43174 497 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 DSG3P32926 999 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 AKT1S1Q96B36 256 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 ASIC4Q96FT7 647 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 MED15Q96RN5 788 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 AGPAT1Q99943 283 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 APEX2Q9UBZ4 518 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 ANO9A1A5B4 782 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 MUTP22033 750 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 FMO5P49326 533 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 DPYDQ12882 1025 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 CUL1Q13616 776 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 MKNK1Q9BUB5 465 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 DYRK4Q9NR20 520 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 FDPSP14324 419 aaKnown RBP18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 PCK1P35558 622 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 SREBF1P36956 1147 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 PNPLA4P41247 253 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 CASP7P55210 303 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 PDXDC1Q6P996 788 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 CATSPER3Q86XQ3 398 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 DNERQ8NFT8 737 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 FAM163AQ96GL9 167 aaPredicted RBP18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 MMEL1Q495T6 779 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 CDKL3Q8IVW4 592 aaPredicted RBP18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 SH3TC2Q8TF17 1288 aa18.8■□□□□ 0.6
CDC42EP3-201ENST00000295324 IQANK1A0A1B0GTG1 560 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 EXTL3O43909 919 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 TAF1BQ53T94 588 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 UNC45AQ9H3U1 944 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 HPS5Q9UPZ3 1129 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 MYBP10242 640 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 RFFLQ8WZ73 363 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 STK33Q9BYT3 514 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 PPATQ06203 517 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 TARS2Q9BW92 718 aaKnown RBP18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 NT5C1AQ9BXI3 368 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 ARHGAP42A6NI28 874 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 HOXA2O43364 376 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 WNT8AQ9H1J5 351 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 TRPC7Q9HCX4 862 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 TUBE1Q9UJT0 475 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 ZMYND10O75800 440 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 NPTXRO95502 500 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 ALDH7A1P49419 539 aaKnown RBP18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 STKLD1Q8NE28 680 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 TMEM169Q96HH4 297 aa18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 ZNF512Q96ME7 567 aaPredicted RBP18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 MMTAG2Q9BU76 263 aaKnown RBP18.79■□□□□ 0.6
CDC42EP3-201ENST00000295324 KRT37O76014 449 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 STK4Q13043 487 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 COLEC11Q9BWP8 271 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 CAPS2Q9BXY5 557 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 TEX33O43247 280 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 ZNF235Q14590 738 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 ABCF3Q9NUQ8 709 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 UBQLN1Q9UMX0 589 aaKnown RBP18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 ZDHHC9Q9Y397 364 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 ADM5C9JUS6 153 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 CDH6P55285 790 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 SYT2Q8N9I0 419 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 SCG3Q8WXD2 468 aaKnown RBP18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 TAF6LQ9Y6J9 622 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 RASGRF2O14827 1237 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 TTI1O43156 1089 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 RTN2O75298 545 aa18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 EIF3BP55884 814 aaKnown RBP18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 CACNB2Q08289 660 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 ZC2HC1CQ53FD0 456 aaPredicted RBP18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 LIMA1Q9UHB6 759 aaKnown RBP18.78■□□□□ 0.6
CDC42EP3-201ENST00000295324 PDGFRBP09619 1106 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 ATXN8OSP0DMR3 200 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 SHMT1P34896 483 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 STARD7Q9NQZ5 370 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 GLE1Q53GS7 698 aaKnown RBP18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 PCNX4Q63HM2 1172 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 CEP120Q8N960 986 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 RBBP8NLQ8NC74 664 aaPredicted RBP18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 CDCA5Q96FF9 252 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 PLEKHA5Q9HAU0 1116 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 MROH2AA6NES4 1674 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 OAZ1P54368 228 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 CAV1Q03135 178 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 DRP2Q13474 957 aa18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 SEPT5Q99719 369 aaPredicted RBP18.77■□□□□ 0.6
CDC42EP3-201ENST00000295324 TMEM8AQ9HCN3 771 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms