RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ACTN1P12814 892 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 NLRP14Q86W24 1093 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 SIAH1Q8IUQ4 282 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 ARHGAP18Q8N392 663 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 STAG2Q8N3U4 1231 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 RUBCNQ92622 972 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 TMEM206Q9H813 350 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 IPO11Q9UI26 975 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 SYNGAP1Q96PV0 1343 aa12.63□□□□□ -0.39
SYNGAP1-201ENST00000293748 SNHG28P0DPA3 235 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 ARRDC4Q8NCT1 418 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 PXYLP1Q8TE99 480 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 CALR3Q96L12 384 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 MRPL46Q9H2W6 279 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 KBTBD13C9JR72 458 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 LRRN2O75325 713 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 RARBP10826 455 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 PIK3CAP42336 1068 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 IRF5Q13568 498 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 BAATQ14032 418 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 KCNV1Q6PIU1 500 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 HACE1Q8IYU2 909 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 CCDC124Q96CT7 223 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 ZMAT2Q96NC0 199 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 ACCSQ96QU6 501 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 DISC1Q9NRI5 854 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 MAD2L2Q9UI95 211 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 ORC6Q9Y5N6 252 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 KRT1P04264 644 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 PLCG1P19174 1290 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 INPP1P49441 399 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 GLG1Q92896 1179 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 DACT3Q96B18 629 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 RMDN3Q96TC7 470 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 TRAIPQ9BWF2 469 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 MCOLN1Q9GZU1 580 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 UPF3AQ9H1J1 476 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 FAM96AQ9H5X1 160 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 VIPAS39Q9H9C1 493 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 PCDHB4Q9Y5E5 795 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 SAT1P21673 171 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 TMOD1P28289 359 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 CAV1Q03135 178 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 TBCKQ8TEA7 893 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 WDR11Q9BZH6 1224 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 YIPF3Q9GZM5 350 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 PORCNQ9H237 461 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 ALDH8A1Q9H2A2 487 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 PTCH2Q9Y6C5 1203 aa12.62□□□□□ -0.39
SYNGAP1-201ENST00000293748 GRID2IPA4D2P6 1211 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 HNRNPDLO14979 420 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 ACSL3O95573 720 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 MYO1EQ12965 1108 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 RAPH1Q70E73 1250 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 PIP4K2CQ8TBX8 421 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 RASGRP4Q8TDF6 673 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 ATP6V1G3Q96LB4 118 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 MXI1P50539 228 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 MAGOHP61326 146 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 ART3Q13508 389 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 RAB44Q7Z6P3 723 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 WDR75Q8IWA0 830 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 DNERQ8NFT8 737 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 CPVLQ9H3G5 476 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 TLK1Q9UKI8 766 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 KRT37O76014 449 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 PLEKHA8P1O95397 391 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 BASP1P80723 227 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 SEMA3FQ13275 785 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 AP3B2Q13367 1082 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 PRPSAP1Q14558 356 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 TTLL4Q14679 1199 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 CAPRIN2Q6IMN6 1127 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 PYROXD1Q8WU10 500 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 ADPGKQ9BRR6 497 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 RIOX1Q9H6W3 641 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 KLC4Q9NSK0 619 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 CEP72Q9P209 647 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 TOM1L1O75674 476 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 PALMO75781 387 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 ABCD1P33897 745 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 MDM2Q00987 491 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 BBS9Q3SYG4 887 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 DNAJC24Q6P3W2 148 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 CRLF3Q8IUI8 442 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 NACC1Q96RE7 527 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 NACA2Q9H009 215 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 SNX24Q9Y343 169 aa12.61□□□□□ -0.39
SYNGAP1-201ENST00000293748 SRGAP2BP0DMP2 458 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 EEF1DP29692 281 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 ACTN3Q08043 901 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 BEND6Q5SZJ8 279 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 PCGF5Q86SE9 256 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms