RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 TRAPPC9Q96Q05 1148 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 MIPEPQ99797 713 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 STARD13Q9Y3M8 1113 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 ATP8B3O60423 1300 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 CAPN9O14815 690 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 CALUO43852 315 aaPredicted RBP18.38■□□□□ 0.53
LRRC56-201ENST00000270115 DCTN3O75935 186 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 FTLP02792 175 aaPredicted RBP18.38■□□□□ 0.53
LRRC56-201ENST00000270115 RASSF2P50749 326 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 PSMC6P62333 389 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 RASIP1Q5U651 963 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 DZIP1Q86YF9 867 aaKnown RBP18.38■□□□□ 0.53
LRRC56-201ENST00000270115 SLC13A5Q86YT5 568 aaPredicted RBP18.38■□□□□ 0.53
LRRC56-201ENST00000270115 BICD1Q96G01 975 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 C9orf72Q96LT7 481 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 WNK3Q9BYP7 1800 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 ANKRD36CQ5JPF3 1778 aa18.38■□□□□ 0.53
LRRC56-201ENST00000270115 RSPH10B2B2RC85 870 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 RSPH10BP0C881 870 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 ERFP50548 548 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 ITGA8P53708 1063 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 CDR2Q01850 454 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 MOGSQ13724 837 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 UBE4AQ14139 1066 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 KPNB1Q14974 876 aaKnown RBP18.37■□□□□ 0.53
LRRC56-201ENST00000270115 TMEM63BQ5T3F8 832 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 RFX8Q6ZV50 586 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 TGFBRAP1Q8WUH2 860 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 STK33Q9BYT3 514 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 DNAJC18Q9H819 358 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 NINJ2Q9NZG7 142 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 FAM47DPA6NHR8 397 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 MIF4GDA9UHW6 222 aaKnown RBP18.37■□□□□ 0.53
LRRC56-201ENST00000270115 MED24O75448 989 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 PTPN4P29074 926 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 MTDHQ86UE4 582 aaKnown RBP18.37■□□□□ 0.53
LRRC56-201ENST00000270115 ATG4AQ8WYN0 398 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 MRRFQ96E11 262 aaKnown RBP18.37■□□□□ 0.53
LRRC56-201ENST00000270115 ZFP69BQ9UJL9 534 aa18.37■□□□□ 0.53
LRRC56-201ENST00000270115 SFI1A8K8P3 1242 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 CLDN3O15551 220 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 TJP3O95049 919 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 GCNT3O95395 438 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 DYNC1I2Q13409 638 aaKnown RBP18.36■□□□□ 0.53
LRRC56-201ENST00000270115 GIT2Q14161 759 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 KIAA0825Q8IV33 1275 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 C7orf43Q8WVR3 580 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 REEP2Q9BRK0 252 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 DHX36Q9H2U1 1008 aaKnown RBP18.36■□□□□ 0.53
LRRC56-201ENST00000270115 USP21Q9UK80 565 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 GRID1Q9ULK0 1009 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 NUMBLQ9Y6R0 609 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 RPS6KL1Q9Y6S9 549 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 SPOPO43791 374 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 LMNAP02545 664 aaKnown RBP18.36■□□□□ 0.53
LRRC56-201ENST00000270115 GSTA2P09210 222 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 SIX1Q15475 284 aaPredicted RBP18.36■□□□□ 0.53
LRRC56-201ENST00000270115 ACSBG2Q5FVE4 666 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 LRRC74BQ6ZQY2 392 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 C3orf67Q6ZVT6 689 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 MAPKAPK5Q8IW41 473 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 CADM1Q9BY67 442 aaKnown RBP18.36■□□□□ 0.53
LRRC56-201ENST00000270115 GPR88Q9GZN0 384 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 UBN1Q9NPG3 1134 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 SUGT1Q9Y2Z0 365 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 ASTN1O14525 1302 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 ADGRA3Q8IWK6 1321 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 KDM3AQ9Y4C1 1321 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 SLC12A3P55017 1021 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 CYP4F22Q6NT55 531 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 CCDC125Q86Z20 511 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 RHOT2Q8IXI1 618 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 KLHL23Q8NBE8 558 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 NDNQ99608 321 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 SYT11Q9BT88 431 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 METTL14Q9HCE5 456 aaKnown RBP18.36■□□□□ 0.53
LRRC56-201ENST00000270115 MINPP1Q9UNW1 487 aa18.36■□□□□ 0.53
LRRC56-201ENST00000270115 TBX10O75333 385 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 SCNN1BP51168 640 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 MEX3CQ5U5Q3 659 aaKnown RBP18.35■□□□□ 0.53
LRRC56-201ENST00000270115 ANKRD35Q8N283 1001 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 EYA3Q99504 573 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 NPHS2Q9NP85 383 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 CHCHD3Q9NX63 227 aaKnown RBP18.35■□□□□ 0.53
LRRC56-201ENST00000270115 DCTN4Q9UJW0 460 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 GOLGB1Q14789 3259 aaKnown RBP18.35■□□□□ 0.53
LRRC56-201ENST00000270115 GSTTP1A0A1W2PQM5 241 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 MAGEA13PA6NCF6 341 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 FOXN3O00409 490 aaPredicted RBP18.35■□□□□ 0.53
LRRC56-201ENST00000270115 PDXKO00764 312 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 CDH16O75309 829 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 ASMTLO95671 621 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 TRIM49P0CI25 452 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 TRIM49CP0CI26 452 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 ETS2P15036 469 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 CBWD6Q4V339 395 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 SGO2Q562F6 1265 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 CBWD3Q5JTY5 395 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 CBWD5Q5RIA9 395 aa18.35■□□□□ 0.53
LRRC56-201ENST00000270115 C4orf33Q8N1A6 199 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms