RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 CPT1AP50416 773 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 ANTXR2P58335 489 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 SGSM1Q2NKQ1 1148 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 NUDT18Q6ZVK8 323 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 TBC1D1Q86TI0 1168 aaPredicted RBP14.07□□□□□ -0.16
SMG9-201ENST00000270066 GPRASP2Q96D09 838 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 DNAJC17Q9NVM6 304 aaKnown RBP14.07□□□□□ -0.16
SMG9-201ENST00000270066 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMG9-201ENST00000270066 ORC6Q9Y5N6 252 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 FAM187AA6NFU0 413 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 GNGT2O14610 69 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 FOXN1O15353 648 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 EIF3DO15371 548 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMG9-201ENST00000270066 TGFB2P61812 414 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 DGKDQ16760 1214 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 FAM96AQ9H5X1 160 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 ABCF3Q9NUQ8 709 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 MOCS2O96007 188 aaPredicted RBP14.07□□□□□ -0.16
SMG9-201ENST00000270066 LCP1P13796 627 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 MX2P20592 715 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 GRIK1P39086 918 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 AP1B1Q10567 949 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 DPYDQ12882 1025 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 LAMC2Q13753 1193 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 WDR72Q3MJ13 1102 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 SAMD7Q7Z3H4 446 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 CRLF3Q8IUI8 442 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 GLYCTKQ8IVS8 523 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 ZBTB18Q99592 522 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 PPP1R9AQ9ULJ8 1098 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 PLAAQ9Y263 795 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 STK25O00506 426 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 PPP1R12AO14974 1030 aaPredicted RBP14.07□□□□□ -0.16
SMG9-201ENST00000270066 SPARCL1Q14515 664 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 OSBPL9Q96SU4 736 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 ANKEF1Q9NU02 776 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 APEX2Q9UBZ4 518 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 APOL1O14791 398 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 TEX33O43247 280 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 TADA2AO75478 443 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 RPS6KA5O75582 802 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 ART3Q13508 389 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 CLEC17AQ6ZS10 378 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 PDZD8Q8NEN9 1154 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 EXT2Q93063 718 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 EPAS1Q99814 870 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 STK33Q9BYT3 514 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 ACTR5Q9H9F9 607 aaPredicted RBP14.07□□□□□ -0.16
SMG9-201ENST00000270066 PRMT7Q9NVM4 692 aaPredicted RBP14.07□□□□□ -0.16
SMG9-201ENST00000270066 EHD2Q9NZN4 543 aa14.07□□□□□ -0.16
SMG9-201ENST00000270066 GYS1P13807 737 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 FXR2P51116 673 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMG9-201ENST00000270066 GSPT2Q8IYD1 628 aaKnown RBP14.06□□□□□ -0.16
SMG9-201ENST00000270066 ADSSL1Q8N142 457 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 TTC8Q8TAM2 541 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 ZC3H15Q8WU90 426 aaKnown RBP14.06□□□□□ -0.16
SMG9-201ENST00000270066 ABTB1Q969K4 478 aaPredicted RBP14.06□□□□□ -0.16
SMG9-201ENST00000270066 TJP2Q9UDY2 1190 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 MOSPD1Q9UJG1 213 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 TRIM66O15016 1216 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 SNX17Q15036 470 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 EDRF1Q3B7T1 1238 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 ALKBH8Q96BT7 664 aaKnown RBP14.06□□□□□ -0.16
SMG9-201ENST00000270066 ITGA4P13612 1032 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 FCGRTP55899 365 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 YAF2Q8IY57 180 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 BFARQ9NZS9 450 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 CYP26A1O43174 497 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 HSD17B4P51659 736 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 SNRNP35Q16560 246 aaKnown RBP14.06□□□□□ -0.16
SMG9-201ENST00000270066 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
SMG9-201ENST00000270066 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 DAGLBQ8NCG7 672 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 ATG4CQ96DT6 458 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 SERPINI1Q99574 410 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 PLEKHA5Q9HAU0 1116 aa14.06□□□□□ -0.16
SMG9-201ENST00000270066 WDR91A4D1P6 747 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 FAM205CA6NFA0 338 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 CTIFO43310 598 aaKnown RBP14.05□□□□□ -0.16
SMG9-201ENST00000270066 CYBBP04839 570 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 ICAM1P05362 532 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 NCF2P19878 526 aaPredicted RBP14.05□□□□□ -0.16
SMG9-201ENST00000270066 CDH6P55285 790 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 TTC30AQ86WT1 665 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 ASIC4Q96FT7 647 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 ADGRG1Q9Y653 693 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 IGSF9BQ9UPX0 1349 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 KRT14P02533 472 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 CTSHP09668 335 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 NSUN2Q08J23 767 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMG9-201ENST00000270066 NCOA4Q13772 614 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 SV2CQ496J9 727 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 PRAMEF18Q5VWM3 479 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 COL23A1Q86Y22 540 aaPredicted RBP14.05□□□□□ -0.16
SMG9-201ENST00000270066 LRRC43Q8N309 656 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 SAMD3Q8N6K7 520 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 C18orf8Q96DM3 657 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 SNF8Q96H20 258 aa14.05□□□□□ -0.16
SMG9-201ENST00000270066 GPBP1L1Q9HC44 474 aaPredicted RBP14.05□□□□□ -0.16
SMG9-201ENST00000270066 CHUKO15111 745 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms