RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 TOMM70O94826 608 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 ZRANB2O95218 330 aaKnown RBP eCLIP22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 PNMA6AP0CW24 399 aaPredicted RBP22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 TMOD1P28289 359 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 MAGEA1P43355 309 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 CLDN10P78369 228 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 POU5F1BQ06416 359 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 TERF2Q15554 542 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 SLC18A3Q16572 532 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 ZNF571Q7Z3V5 609 aaPredicted RBP22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 FMNL3Q8IVF7 1028 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 ARHGEF19Q8IW93 802 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 SLC35F6Q8N357 371 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 FNBP1Q96RU3 617 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 UBE2TQ9NPD8 197 aaPredicted RBP22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 RBAKQ9NYW8 714 aaPredicted RBP22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 INO80B-WBP1J3KQ70 363 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 ACKR2O00590 384 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 ALDH1A1P00352 501 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 YY1P25490 414 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 MBTD1Q05BQ5 628 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 ARHGAP44Q17R89 818 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 ZBTB41Q5SVQ8 909 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 SV2AQ7L0J3 742 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 FBXL13Q8NEE6 735 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 SEMA4DQ92854 862 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 VTI1AQ96AJ9 217 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 LENG1Q96BZ8 264 aaPredicted RBP22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 TCHPQ9BT92 498 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 INO80BQ9C086 356 aaPredicted RBP22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 AKT3Q9Y243 479 aa22.25■■□□□ 1.15
LYSMD2-201ENST00000267838 A0A087X0T9 212 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 EVI5O60447 810 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 FAM228BP0C875 321 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 HARSP12081 509 aaKnown RBP22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 PHKA2P46019 1235 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 GPC3P51654 580 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 FCGRTP55899 365 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 TUBB4BP68371 445 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 MARCH8Q5T0T0 291 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 ZBTB33Q86T24 672 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 TXLNBQ8N3L3 684 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 RABGGTAQ92696 567 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 GOLGA1Q92805 767 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 IFT122Q9HBG6 1241 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 ADAMTS1Q9UHI8 967 aa22.24■■□□□ 1.15
LYSMD2-201ENST00000267838 ANXA13P27216 316 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 WNT7BP56706 349 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 PRPF4BQ13523 1007 aaKnown RBP22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 C15orf39Q6ZRI6 1047 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 TSHZ1Q6ZSZ6 1077 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 TAS1R2Q8TE23 839 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 ZNF516Q92618 1163 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 MINDY3Q9H8M7 445 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 PDE11AQ9HCR9 933 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 LUC7LQ9NQ29 371 aaKnown RBP22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 RAB20Q9NX57 234 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 Q9Y3F1 56 aa22.23■■□□□ 1.15
LYSMD2-201ENST00000267838 RRN3P2A6NIE6 340 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 ABLIM1O14639 778 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 PJA2O43164 708 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 F2P00734 622 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 CCDC172P0C7W6 258 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 TNNI1P19237 187 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 PSMC4P43686 418 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 MCL1Q07820 350 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 NOGQ13253 232 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 RSRC2Q7L4I2 434 aaKnown RBP22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 IFNLR1Q8IU57 520 aaPredicted RBP22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 ZNF784Q8NCA9 323 aaPredicted RBP22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 KAT6AQ92794 2004 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 DUSP10Q9Y6W6 482 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 A0A087WZ62 844 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 FAM189A1O60320 539 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 VTNP04004 478 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 PROZP22891 400 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 CPT1AP50416 773 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 SEZ6Q53EL9 994 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 ATF7IP2Q5U623 682 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 MPZL3Q6UWV2 235 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 KAT2BQ92831 832 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 FDXACB1Q9BRP7 624 aaPredicted RBP22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 ARHGAP39Q9C0H5 1083 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 AP5M1Q9H0R1 490 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 PTPRHQ9HD43 1115 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 SETD4Q9NVD3 440 aa22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 PRMT7Q9NVM4 692 aaPredicted RBP22.22■■□□□ 1.15
LYSMD2-201ENST00000267838 CTAGE9A4FU28 777 aa22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 FOXN3O00409 490 aaPredicted RBP22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 OGTO15294 1046 aa22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 B4GALT5O43286 388 aa22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 LACTBP83111 547 aaPredicted RBP22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 FAM187BQ17R55 369 aa22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 KIAA0753Q2KHM9 967 aa22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 TAF3Q5VWG9 929 aa22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 LMBRD2Q68DH5 695 aaPredicted RBP22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 VPS36Q86VN1 386 aa22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 BRSK2Q8IWQ3 736 aa22.21■■□□□ 1.15
LYSMD2-201ENST00000267838 NT5C1BQ96P26 610 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms