RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 HPSEQ9Y251 543 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 NOC2LQ9Y3T9 749 aaKnown RBP16.38■□□□□ 0.21
TIMP3-201ENST00000266085 RBP5P82980 135 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 NAA30Q147X3 362 aaPredicted RBP16.38■□□□□ 0.21
TIMP3-201ENST00000266085 CDR2LQ86X02 465 aaPredicted RBP16.38■□□□□ 0.21
TIMP3-201ENST00000266085 KCNF1Q9H3M0 494 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 SNX12Q9UMY4 172 aa16.38■□□□□ 0.21
TIMP3-201ENST00000266085 GTF2A2P52657 109 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 GALCP54803 685 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 RBBP5Q15291 538 aaKnown RBP16.37■□□□□ 0.21
TIMP3-201ENST00000266085 TNIP3Q96KP6 325 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 GPRC5CQ9NQ84 441 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 CYP26B1Q9NR63 512 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 KRT10P13645 584 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 IRX4P78413 519 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 TAP1Q03518 808 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 SLC30A5Q8TAD4 765 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 RNPC3Q96LT9 517 aaKnown RBP16.37■□□□□ 0.21
TIMP3-201ENST00000266085 GCNAQ96QF7 691 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 MID2Q9UJV3 735 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 TAL1P17542 331 aaPredicted RBP16.37■□□□□ 0.21
TIMP3-201ENST00000266085 MMEL1Q495T6 779 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 ATF7IP2Q5U623 682 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 MYLK4Q86YV6 388 aaPredicted RBP16.37■□□□□ 0.21
TIMP3-201ENST00000266085 ATP6V1E2Q96A05 226 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 VPS39Q96JC1 886 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 PDCD2LQ9BRP1 358 aa16.37■□□□□ 0.21
TIMP3-201ENST00000266085 TRIM56Q9BRZ2 755 aaKnown RBP16.37■□□□□ 0.21
TIMP3-201ENST00000266085 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
TIMP3-201ENST00000266085 FAM187AA6NFU0 413 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 SMIM22K7EJ46 135 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 GYPCP04921 128 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 TMEM132DQ14C87 1099 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 CCDC137Q6PK04 289 aaKnown RBP16.36■□□□□ 0.21
TIMP3-201ENST00000266085 LRRC31Q6UY01 552 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 SYTL5Q8TDW5 730 aaPredicted RBP16.36■□□□□ 0.21
TIMP3-201ENST00000266085 S100BP04271 92 aaPredicted RBP16.36■□□□□ 0.21
TIMP3-201ENST00000266085 DGKDQ16760 1214 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 SPOPLQ6IQ16 392 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 DEPDC1BQ8WUY9 529 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 TAF1DQ9H5J8 278 aaPredicted RBP16.36■□□□□ 0.21
TIMP3-201ENST00000266085 KBTBD4Q9NVX7 518 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 MYO5BQ9ULV0 1848 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 CREB3O43889 395 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 C18orf8Q96DM3 657 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 KIAA1683Q9H0B3 1180 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 GBA2Q9HCG7 927 aaPredicted RBP16.36■□□□□ 0.21
TIMP3-201ENST00000266085 HLA-DRAP01903 254 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 NLRP11P59045 1033 aaKnown RBP16.36■□□□□ 0.21
TIMP3-201ENST00000266085 RCN2Q14257 317 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 SGSM1Q2NKQ1 1148 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 MAP1SQ66K74 1059 aaPredicted RBP16.36■□□□□ 0.21
TIMP3-201ENST00000266085 RAD9BQ6WBX8 426 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 AGPAT3Q9NRZ7 376 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 DDX56Q9NY93 547 aaKnown RBP16.36■□□□□ 0.21
TIMP3-201ENST00000266085 MAP3K20Q9NYL2 800 aaKnown RBP16.36■□□□□ 0.21
TIMP3-201ENST00000266085 UVRAGQ9P2Y5 699 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 ANGPTL3Q9Y5C1 460 aa16.36■□□□□ 0.21
TIMP3-201ENST00000266085 GOLGA8QA0A0J9YX86 632 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 WDR91A4D1P6 747 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 GOLGA8OA6NCC3 632 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 GOLGA8NF8WBI6 632 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 TOM1L1O75674 476 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 KRT3P12035 628 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 PMLP29590 882 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 SNRPFP62306 86 aaKnown RBP16.35■□□□□ 0.21
TIMP3-201ENST00000266085 EARS2Q5JPH6 523 aaKnown RBP16.35■□□□□ 0.21
TIMP3-201ENST00000266085 NUGGCQ68CJ6 796 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 GSPT2Q8IYD1 628 aaKnown RBP16.35■□□□□ 0.21
TIMP3-201ENST00000266085 ERGIC2Q96RQ1 377 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 EPC1Q9H2F5 836 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 DHX35Q9H5Z1 703 aaKnown RBP16.35■□□□□ 0.21
TIMP3-201ENST00000266085 KRT38O76015 456 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 CPB1P15086 417 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 RHBDL3P58872 404 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 COG7P83436 770 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 RBBP8NLQ8NC74 664 aaPredicted RBP16.35■□□□□ 0.21
TIMP3-201ENST00000266085 GDAP1Q8TB36 358 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 TTC25Q96NG3 672 aa16.35■□□□□ 0.21
TIMP3-201ENST00000266085 VEGFAP15692 232 aaPredicted RBP16.34■□□□□ 0.21
TIMP3-201ENST00000266085 TM4SF1P30408 202 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 TSTA3Q13630 321 aaPredicted RBP16.34■□□□□ 0.21
TIMP3-201ENST00000266085 HEATR6Q6AI08 1181 aaKnown RBP16.34■□□□□ 0.21
TIMP3-201ENST00000266085 KLHL29Q96CT2 875 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 C17orf75Q9HAS0 396 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 ADAM21Q9UKJ8 722 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 PPP2R3BQ9Y5P8 575 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 RPS6KA5O75582 802 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 KLK7P49862 253 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 CDH6P55285 790 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 DBN1Q16643 649 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 SIK2Q9H0K1 926 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 MROH8Q9H579 483 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 AMACRQ9UHK6 382 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 UBR1Q8IWV7 1749 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 RASA4BC9J798 803 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 RASA4O43374 803 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 BAG2O95816 211 aa16.34■□□□□ 0.21
TIMP3-201ENST00000266085 SLC1A1P43005 524 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms