RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 PPFIA2O75334 1257 aa18.19■□□□□ 0.5
SRF-201ENST00000265354 SNUPNO95149 360 aaKnown RBP18.19■□□□□ 0.5
SRF-201ENST00000265354 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.19■□□□□ 0.5
SRF-201ENST00000265354 LGSNQ5TDP6 509 aa18.19■□□□□ 0.5
SRF-201ENST00000265354 INTS5Q6P9B9 1019 aaKnown RBP18.19■□□□□ 0.5
SRF-201ENST00000265354 PPM1NQ8N819 430 aa18.19■□□□□ 0.5
SRF-201ENST00000265354 ARHGEF1Q92888 912 aaKnown RBP18.19■□□□□ 0.5
SRF-201ENST00000265354 SLC5A5Q92911 643 aa18.19■□□□□ 0.5
SRF-201ENST00000265354 TMEM206Q9H813 350 aa18.19■□□□□ 0.5
SRF-201ENST00000265354 IFT122Q9HBG6 1241 aa18.19■□□□□ 0.5
SRF-201ENST00000265354 COX16Q9P0S2 106 aa18.19■□□□□ 0.5
SRF-201ENST00000265354 MRPL11Q9Y3B7 192 aaKnown RBP18.19■□□□□ 0.5
SRF-201ENST00000265354 STK24Q9Y6E0 443 aa18.19■□□□□ 0.5
SRF-201ENST00000265354 FAM47DPA6NHR8 397 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 RASSF10A6NK89 507 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 TISP43B9A030 160 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 CFLARO15519 480 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 CBX6O95503 412 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 RALAP11233 206 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 KRT10P13645 584 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 KLC1Q07866 573 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 SF3B3Q15393 1217 aaKnown RBP18.18■□□□□ 0.5
SRF-201ENST00000265354 DAB2IPQ5VWQ8 1189 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 DNAJC24Q6P3W2 148 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 PDIK1LQ8N165 341 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 AGR3Q8TD06 166 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 KAT5Q92993 513 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 TSNARE1Q96NA8 513 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 IWS1Q96ST2 819 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 DAGLAQ9Y4D2 1042 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 IPO5O00410 1097 aaKnown RBP18.18■□□□□ 0.5
SRF-201ENST00000265354 C1orf146Q5VVC0 180 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 HAUS6Q7Z4H7 955 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 SEPT9Q9UHD8 586 aaPredicted RBP18.18■□□□□ 0.5
SRF-201ENST00000265354 DRD4P21917 467 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 ARL1P40616 181 aaPredicted RBP18.18■□□□□ 0.5
SRF-201ENST00000265354 ZBTB33Q86T24 672 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 CEP70Q8NHQ1 597 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 ATP8B4Q8TF62 1192 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 SNRNP27Q8WVK2 155 aaKnown RBP18.18■□□□□ 0.5
SRF-201ENST00000265354 DNAJC9Q8WXX5 260 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 FAM20AQ96MK3 541 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 WDR11Q9BZH6 1224 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 C15orf41Q9Y2V0 281 aa18.18■□□□□ 0.5
SRF-201ENST00000265354 STAM2O75886 525 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 EYA4O95677 639 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 LAMB3Q13751 1172 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 PDCD2Q16342 344 aaPredicted RBP18.17■□□□□ 0.5
SRF-201ENST00000265354 CYFIP1Q7L576 1253 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 DAGLBQ8NCG7 672 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 ATL2Q8NHH9 583 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 DHX38Q92620 1227 aaKnown RBP18.17■□□□□ 0.5
SRF-201ENST00000265354 SLC35C1Q96A29 364 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 DENND3A2RUS2 1198 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 RTN2O75298 545 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 CPP00450 1065 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 ENO1P06733 434 aaKnown RBP18.17■□□□□ 0.5
SRF-201ENST00000265354 PTENP60484 403 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 TFAMQ00059 246 aaKnown RBP18.17■□□□□ 0.5
SRF-201ENST00000265354 CUL3Q13618 768 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 MTERF2Q49AM1 385 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 C16orf86Q6ZW13 317 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 RHPN2Q8IUC4 686 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 HSPH1Q92598 858 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 CBWD1Q9BRT8 395 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 TMEM165Q9HC07 324 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 NEU2Q9Y3R4 380 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 RPA1P27694 616 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 ARHGEF16Q5VV41 709 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 RINT1Q6NUQ1 792 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.17■□□□□ 0.51e-11■■□□□ 13.8
SRF-201ENST00000265354 NAF1Q96HR8 494 aaKnown RBP18.17■□□□□ 0.5
SRF-201ENST00000265354 FAM84AQ96KN4 292 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 ZSWIM1Q9BR11 485 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 ERVK-5Q9HDB9 667 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 PI4KBQ9UBF8 816 aa18.17■□□□□ 0.5
SRF-201ENST00000265354 ATXN3P54252 364 aaPredicted RBP18.16■□□□□ 0.5
SRF-201ENST00000265354 PDE1BQ01064 536 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 ERMARDQ5T6L9 678 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 LVRNQ6Q4G3 990 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 ZMAT2Q96NC0 199 aaKnown RBP18.16■□□□□ 0.5
SRF-201ENST00000265354 ATP6V0A4Q9HBG4 840 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 BATF3Q9NR55 127 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 ZNF335Q9H4Z2 1342 aaPredicted RBP18.16■□□□□ 0.5
SRF-201ENST00000265354 RARGP13631 454 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 CREB1P16220 341 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 MAGEA4P43358 317 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 BCAS3Q9H6U6 928 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 GPRC5CQ9NQ84 441 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 PHTF1Q9UMS5 762 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 PITPNM2Q9BZ72 1349 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 RNF8O76064 485 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 AOC3Q16853 763 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 DARS2Q6PI48 645 aaKnown RBP18.16■□□□□ 0.5
SRF-201ENST00000265354 ALG3Q92685 438 aa18.16■□□□□ 0.5
SRF-201ENST00000265354 RIPK2O43353 540 aa18.15■□□□□ 0.5
SRF-201ENST00000265354 SERPINB4P48594 390 aa18.15■□□□□ 0.5
SRF-201ENST00000265354 THEMIS2Q5TEJ8 643 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms