RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 TEX33O43247 280 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 MARCH6O60337 910 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 CCNT1O60563 726 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 PLA2G6O60733 806 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 KIF20AO95235 890 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 H2AFXP16104 143 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 CCNE1P24864 410 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 MCM3P25205 808 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 CASP14P31944 242 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 ADCY7P51828 1080 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 PSMD2Q13200 908 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 BTG3Q14201 252 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 KARSQ15046 597 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 BRD3Q15059 726 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 WHAMMP3Q1A5X7 153 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 ERCC6LQ2NKX8 1250 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 FKBP15Q5T1M5 1219 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 SYDE2Q5VT97 1194 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 FBXO38Q6PIJ6 1188 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 SV2BQ7L1I2 683 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 STAG2Q8N3U4 1231 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 KREMEN2Q8NCW0 462 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 GIMAP8Q8ND71 665 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 VN1R2Q8NFZ6 395 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 OR8K1Q8NGG5 319 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 CPLX3Q8WVH0 158 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 ATP6V0A1Q93050 837 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 NAPGQ99747 312 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 TSG101Q99816 390 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 C7orf25Q9BPX7 421 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 KATNAL1Q9BW62 490 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 CARD6Q9BX69 1037 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 VPS16Q9H269 839 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 BLZF1Q9H2G9 400 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 ACBD3Q9H3P7 528 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 RC3H2Q9HBD1 1191 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 GPCPD1Q9NPB8 672 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 KBTBD4Q9NVX7 518 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 PLAGL2Q9UPG8 496 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 MRFAP1Q9Y605 127 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 FANCMQ8IYD8 2048 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 ABCB11O95342 1321 aa7.72□□□□□ -1.17
SMARCE1-201ENST00000264640 OTOGLQ3ZCN5 2332 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 PVALEFA0A1B0GWK0 134 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 TREHO43280 583 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 ITGB1P05556 798 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 GCFC2P16383 781 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 KRT9P35527 623 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 CCT6AP40227 531 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 PRCPP42785 496 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 MTIF2P46199 727 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 MRPL12P52815 198 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 ASIC1P78348 528 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 PDIA5Q14554 519 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 CALCRLQ16602 461 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 LETM2Q2VYF4 491 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 USH1GQ495M9 461 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 PAN2Q504Q3 1202 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 GPATCH4Q5T3I0 446 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 KRT79Q5XKE5 535 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 FOXR2Q6PJQ5 311 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 TOGARAM2Q6ZUX3 1019 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 APTXQ7Z2E3 356 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 SRGAP1Q7Z6B7 1085 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 CCDC170Q8IYT3 715 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 DNERQ8NFT8 737 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 SUSD6Q92537 303 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 CLP1Q92989 425 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 PPP2R3CQ969Q6 453 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 TSGA10Q9BZW7 698 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 HAUS4Q9H6D7 363 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 RIOX1Q9H6W3 641 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 ARFGAP3Q9NP61 516 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 ATP13A2Q9NQ11 1180 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 ABHD10Q9NUJ1 306 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 TAB2Q9NYJ8 693 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 COL20A1Q9P218 1284 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 CDC23Q9UJX2 597 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 RALYQ9UKM9 306 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 RWDD3Q9Y3V2 267 aa7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 MRPL42Q9Y6G3 142 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 V9GYY5 206 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-201ENST00000264640 DENND4AQ7Z401 1863 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 PNMA6FA0A0J9YX94 578 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 C17orf102A2RUQ5 167 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 SOWAHDA6NJG2 315 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 KRT86O43790 486 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 SMIM10L2AP0DMW4 78 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 SMIM10L2BP0DMW5 78 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 ATF7P17544 494 aaPredicted RBP7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 PLCG1P19174 1290 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 NOVP48745 357 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 CKAP4Q07065 602 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 GOLGA8FQ08AF8 430 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 GOLGA8DPQ0D2H9 430 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 TRAF1Q13077 416 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 MTMR3Q13615 1198 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 IL17AQ16552 155 aa7.7□□□□□ -1.18
SMARCE1-201ENST00000264640 FIGNQ5HY92 759 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms