RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MICAL1Q8TDZ2 1067 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 CPA5Q8WXQ8 436 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 FBXL5Q9UKA1 691 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 MYO1CO00159 1063 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
CDH3-201ENST00000264012 TAF1CQ15572 869 aaPredicted RBP14.85□□□□□ -0.03
CDH3-201ENST00000264012 KLHL38Q2WGJ6 581 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 PDCD7Q8N8D1 485 aaKnown RBP14.85□□□□□ -0.03
CDH3-201ENST00000264012 MAML1Q92585 1016 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 IGSF9BQ9UPX0 1349 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 DDTLA6NHG4 134 aaPredicted RBP14.84□□□□□ -0.03
CDH3-201ENST00000264012 MAGEB2O15479 319 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 KRT10P13645 584 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 MAGEA9P43362 315 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 PKN1Q16512 942 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 EFHC2Q5JST6 749 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 HP1BP3Q5SSJ5 553 aaPredicted RBP14.84□□□□□ -0.03
CDH3-201ENST00000264012 MOXD1Q6UVY6 613 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 LRRC31Q6UY01 552 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 TEX2Q8IWB9 1127 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 FBXL16Q8N461 479 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 RBBP8NLQ8NC74 664 aaPredicted RBP14.84□□□□□ -0.03
CDH3-201ENST00000264012 TNIP3Q96KP6 325 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 RBP5P82980 135 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 ROR1Q01973 937 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 KLHDC7AQ5VTJ3 777 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 IZUMO3Q5VZ72 239 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 ANKRD7Q92527 254 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 DHX38Q92620 1227 aaKnown RBP14.84□□□□□ -0.03
CDH3-201ENST00000264012 UNC45AQ9H3U1 944 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 UBN1Q9NPG3 1134 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 SNX9Q9Y5X1 595 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 FAM205AQ6ZU69 1335 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 MED24O75448 989 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 PDIA2Q13087 525 aaKnown RBP14.84□□□□□ -0.03
CDH3-201ENST00000264012 SGSM1Q2NKQ1 1148 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 URGCPQ8TCY9 931 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 ZKSCAN4Q969J2 545 aaPredicted RBP14.84□□□□□ -0.03
CDH3-201ENST00000264012 GPRASP2Q96D09 838 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 RUSC1Q9BVN2 902 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 BNIP3LO60238 219 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 TMPRSS15P98073 1019 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 NME3Q13232 169 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 TAF1BQ53T94 588 aaPredicted RBP14.84□□□□□ -0.03
CDH3-201ENST00000264012 RBM43Q6ZSC3 357 aaKnown RBP14.84□□□□□ -0.03
CDH3-201ENST00000264012 FAM47EQ6ZV65 393 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 EPM2AIP1Q7L775 607 aaPredicted RBP14.84□□□□□ -0.03
CDH3-201ENST00000264012 TMEM8AQ9HCN3 771 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 KBTBD4Q9NVX7 518 aa14.84□□□□□ -0.03
CDH3-201ENST00000264012 HLA-DRAP01903 254 aa14.83□□□□□ -0.03
CDH3-201ENST00000264012 SREBF1P36956 1147 aa14.83□□□□□ -0.03
CDH3-201ENST00000264012 SNRPFP62306 86 aaKnown RBP14.83□□□□□ -0.03
CDH3-201ENST00000264012 KRT17Q04695 432 aa14.83□□□□□ -0.03
CDH3-201ENST00000264012 ZBED8Q8IZ13 594 aa14.83□□□□□ -0.03
CDH3-201ENST00000264012 PPM1NQ8N819 430 aa14.83□□□□□ -0.03
CDH3-201ENST00000264012 RDM1Q8NG50 284 aa14.83□□□□□ -0.03
CDH3-201ENST00000264012 SCFD2Q8WU76 684 aa14.83□□□□□ -0.03
CDH3-201ENST00000264012 ACTR5Q9H9F9 607 aaPredicted RBP14.83□□□□□ -0.03
CDH3-201ENST00000264012 ADGRB2O60241 1585 aa14.83□□□□□ -0.03
CDH3-201ENST00000264012 SALL1Q9NSC2 1324 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 CDC42EP1Q00587 391 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 MMS22LQ6ZRQ5 1243 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 GMCL1Q96IK5 515 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 GCNAQ96QF7 691 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 TUBB6Q9BUF5 446 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 AGPAT3Q9NRZ7 376 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 G3BP2Q9UN86 482 aaKnown RBP14.83□□□□□ -0.04
CDH3-201ENST00000264012 PI4K2BG5E9Z4 385 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 PPP2R2AP63151 447 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 HIBCHQ6NVY1 386 aaPredicted RBP14.83□□□□□ -0.04
CDH3-201ENST00000264012 ZNF449Q6P9G9 518 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 FSD1LQ9BXM9 530 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.83□□□□□ -0.04
CDH3-201ENST00000264012 P4HA2O15460 535 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 PAMP19021 973 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 TMEM132DQ14C87 1099 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 KLC3Q6P597 504 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 ZC3H18Q86VM9 953 aaKnown RBP14.83□□□□□ -0.04
CDH3-201ENST00000264012 CDKL3Q8IVW4 592 aaPredicted RBP14.83□□□□□ -0.04
CDH3-201ENST00000264012 ANKRD13AQ8IZ07 590 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 LRRC71Q8N4P6 559 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 ATL2Q8NHH9 583 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 THOC1Q96FV9 657 aaKnown RBP14.83□□□□□ -0.04
CDH3-201ENST00000264012 LRGUKQ96M69 825 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 RIOX1Q9H6W3 641 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 PCDHB2Q9Y5E7 798 aa14.83□□□□□ -0.04
CDH3-201ENST00000264012 MAPK13O15264 365 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 ASAP2O43150 1006 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 BRAFP15056 766 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 HOXD10P28358 340 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 PARK7Q99497 189 aaKnown RBP14.82□□□□□ -0.04
CDH3-201ENST00000264012 TARS2Q9BW92 718 aaKnown RBP14.82□□□□□ -0.04
CDH3-201ENST00000264012 TTI1O43156 1089 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 NCF2P19878 526 aaPredicted RBP14.82□□□□□ -0.04
CDH3-201ENST00000264012 ARSEP51690 589 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 C1orf228Q6PIY5 440 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 DEFB132Q7Z7B7 95 aa14.82□□□□□ -0.04
CDH3-201ENST00000264012 CRLF3Q8IUI8 442 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms