RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CHST7Q9NS84 486 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 DZANK1Q9NVP4 752 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 KCND2Q9NZV8 630 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 GDAQ9Y2T3 454 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 C5orf42Q9H799 3197 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 PHLPP2Q6ZVD8 1323 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 MYH11P35749 1972 aa17.68■□□□□ 0.42
USE1-201ENST00000263897 C2CD2LO14523 706 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 SLC16A4O15374 487 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 URODP06132 367 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 LONP1P36776 959 aaKnown RBP17.67■□□□□ 0.42
USE1-201ENST00000263897 GLUD2P49448 558 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 DSG1Q02413 1049 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 GRIN1Q05586 938 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 RAD51AP2Q09MP3 1159 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 ARSHQ5FYA8 562 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 C12orf76Q8N812 135 aaPredicted RBP17.67■□□□□ 0.42
USE1-201ENST00000263897 SPIRE2Q8WWL2 714 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 RABGGTAQ92696 567 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 CALML4Q96GE6 196 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 GPR62Q9BZJ7 368 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 RXFP1Q9HBX9 757 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 PTPRHQ9HD43 1115 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 ADAM28Q9UKQ2 775 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 TRIP11Q15643 1979 aa17.67■□□□□ 0.42
USE1-201ENST00000263897 FAM86C2PA6NEL3 165 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 TADA2AO75478 443 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 PLS3P13797 630 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 CLCN4P51793 760 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 SMTNP53814 917 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 HSP90AA2PQ14568 343 aaPredicted RBP17.66■□□□□ 0.42
USE1-201ENST00000263897 NAB2Q15742 525 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 USP41Q3LFD5 358 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 HERC4Q5GLZ8 1057 aaPredicted RBP17.66■□□□□ 0.42
USE1-201ENST00000263897 RARS2Q5T160 578 aaKnown RBP17.66■□□□□ 0.42
USE1-201ENST00000263897 KIAA1841Q6NSI8 718 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 KANK3Q6NY19 840 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 FUT10Q6P4F1 479 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 GPR65Q8IYL9 337 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 FBXL18Q96ME1 805 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 NECTIN4Q96NY8 510 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 PAAF1Q9BRP4 392 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 TARS2Q9BW92 718 aaKnown RBP17.66■□□□□ 0.42
USE1-201ENST00000263897 MRPL4Q9BYD3 311 aaKnown RBP17.66■□□□□ 0.42
USE1-201ENST00000263897 CACNG4Q9UBN1 327 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 MUTYHQ9UIF7 546 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 CDH22Q9UJ99 828 aa17.66■□□□□ 0.42
USE1-201ENST00000263897 NPHP3-ACAD11A0A0J9YXS1 232 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 K7ELQ4 463 aaPredicted RBP17.65■□□□□ 0.42
USE1-201ENST00000263897 TEX28O15482 410 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 MTHFRP42898 656 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 RESTQ13127 1097 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 PTPAQ15257 358 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 ATAT1Q5SQI0 421 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 TMEM161BQ8NDZ6 487 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 RIPOR3Q96MK2 946 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 CDT1Q9H211 546 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 BLOC1S4Q9NUP1 217 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 CLIC4Q9Y696 253 aa17.65■□□□□ 0.42
USE1-201ENST00000263897 MYO10Q9HD67 2058 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 CASTOR2A6NHX0 329 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 PRR33A8MZF0 331 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 ADH1AP07327 375 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 MCF2P10911 925 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 PROZP22891 400 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 GRM5P41594 1212 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 KARSQ15046 597 aaKnown RBP17.64■□□□□ 0.41
USE1-201ENST00000263897 ALKAL1Q6UXT8 129 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 LRRC15Q8TF66 581 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 B3GALT6Q96L58 329 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 TCHPQ9BT92 498 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 CCDC94Q9BW85 323 aaPredicted RBP17.64■□□□□ 0.41
USE1-201ENST00000263897 CCSER1Q9C0I3 900 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 POMKQ9H5K3 350 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 FOXD4L1Q9NU39 408 aa17.64■□□□□ 0.41
USE1-201ENST00000263897 LARSQ9P2J5 1176 aaKnown RBP17.64■□□□□ 0.41
USE1-201ENST00000263897 ABLIM1O14639 778 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 BRD1O95696 1058 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 WEE2P0C1S8 567 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 MAPTP10636 758 aaKnown RBP17.63■□□□□ 0.41
USE1-201ENST00000263897 PLCG1P19174 1290 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
USE1-201ENST00000263897 STRN3Q13033 797 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 DHX8Q14562 1220 aaKnown RBP17.63■□□□□ 0.41
USE1-201ENST00000263897 ZNF568Q3ZCX4 644 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 XKR4Q5GH76 650 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 FAM173BQ6P4H8 233 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 TMC5Q6UXY8 1006 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 ZBTB33Q86T24 672 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 GPBP1Q86WP2 473 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 CEP120Q8N960 986 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 RIN2Q8WYP3 895 aaPredicted RBP17.63■□□□□ 0.41
USE1-201ENST00000263897 ZBTB45Q96K62 511 aaPredicted RBP17.63■□□□□ 0.41
USE1-201ENST00000263897 PPP1R10Q96QC0 940 aaKnown RBP17.63■□□□□ 0.41
USE1-201ENST00000263897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.63■□□□□ 0.41
USE1-201ENST00000263897 FNIP2Q9P278 1114 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 RAPGEFL1Q9UHV5 662 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 ODF2LQ9ULJ1 636 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 MTMR6Q9Y217 621 aa17.63■□□□□ 0.41
USE1-201ENST00000263897 SMIM28A0A1B0GU29 152 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms