RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 DNAJC6O75061 913 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 WBP4O75554 376 aaKnown RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 ATP2C1P98194 919 aaPredicted RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 FAM49AQ9H0Q0 323 aaPredicted RBP18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 CYP4F11Q9HBI6 524 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 ZFATQ9P243 1243 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 TIPINQ9BVW5 301 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 OSBPL1AQ9BXW6 950 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 ZSCAN32Q9NX65 697 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 HDAC6Q9UBN7 1215 aa18.45■□□□□ 0.54
NOTCH3-201ENST00000263388 TTC26A0AVF1 554 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 HSPA1AP0DMV8 641 aaKnown RBP18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 HSPA1BP0DMV9 641 aaKnown RBP18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 LXNQ9BS40 222 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 ALDH8A1Q9H2A2 487 aaPredicted RBP18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 SLC26A4O43511 780 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 SARS2Q9NP81 518 aaKnown RBP18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 STXBP3O00186 592 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 BNIP3LO60238 219 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 HADHAP40939 763 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 TTLL4Q14679 1199 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 GRM4Q14833 912 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 DDIASQ8IXT1 998 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 M0QYV0 167 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 EGFL8Q99944 293 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 ARL2BPQ9Y2Y0 163 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 KRT17Q04695 432 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 OPTNQ96CV9 577 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 ABHD8Q96I13 439 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 CFAP69A5D8W1 941 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 STAG2Q8N3U4 1231 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 MPP6Q9NZW5 540 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 PCDHGB4Q9UN71 923 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 ANGPT2O15123 496 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 NCAPHQ15003 741 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 RHPN2Q8IUC4 686 aa18.44■□□□□ 0.54
NOTCH3-201ENST00000263388 BYSLQ13895 437 aaKnown RBP18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 RNF135Q8IUD6 432 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 SH3TC2Q8TF17 1288 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 LTKP29376 864 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 PGM1P36871 562 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 FOXD4Q12950 439 aaPredicted RBP18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 IZUMO3Q5VZ72 239 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 POTEAQ6S8J7 498 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 ATL2Q8NHH9 583 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 TMEM47Q9BQJ4 181 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 MRPL1Q9BYD6 325 aaKnown RBP18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 MYH1P12882 1939 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 MYH2Q9UKX2 1941 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 MYH4Q9Y623 1939 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 LAMB3Q13751 1172 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 DALRD3Q5D0E6 543 aaKnown RBP18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 TTC23LQ6PF05 361 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 OR6P1Q8NGX9 317 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 NSUN6Q8TEA1 469 aaKnown RBP18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 C11orf70Q9BRQ4 267 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 TSSK1BQ9BXA7 367 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 DDX47Q9H0S4 455 aaKnown RBP18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 RUBCNLQ9H714 662 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 SCN4BQ8IWT1 228 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 RNF25Q96BH1 459 aaPredicted RBP18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 ZHX2Q9Y6X8 837 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 NEMP1O14524 444 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 TAGAPQ8N103 731 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 YIPF3Q9GZM5 350 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 WDR47O94967 919 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 HSD17B4P51659 736 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 RCSD1Q6JBY9 416 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 THNSL1Q8IYQ7 743 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 CPDO75976 1380 aa18.43■□□□□ 0.54
NOTCH3-201ENST00000263388 CDH6P55285 790 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 NME3Q13232 169 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 ALX1Q15699 326 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 CYP2C19P33261 490 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 CATSPER3Q86XQ3 398 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 RAB42Q8N4Z0 105 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 PYGMP11217 842 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 CDH2P19022 906 aaPredicted RBP18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 PPP4R4Q6NUP7 873 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 CYB5R4Q7L1T6 521 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 EIF2AK1Q9BQI3 630 aaKnown RBP18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 TUFT1Q9NNX1 390 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 EMSYQ7Z589 1322 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 LBRQ14739 615 aaKnown RBP18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 ADGRF4Q8IZF3 695 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 DDX50Q9BQ39 737 aaKnown RBP18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 PLA2R1Q13018 1463 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 GPD1LQ8N335 351 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 BLOC1S6Q9UL45 172 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 SLC16A4O15374 487 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 ZSCAN9O15535 394 aaPredicted RBP18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 RRM2BQ7LG56 351 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 PGBD4Q96DM1 585 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 FBXL5Q9UKA1 691 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 CDH16O75309 829 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 P3H1Q32P28 736 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 RCOR2Q8IZ40 523 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 KCNV2Q8TDN2 545 aa18.42■□□□□ 0.54
NOTCH3-201ENST00000263388 DEPDC1Q5TB30 811 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms