RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 SMARCA1P28370 1054 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 AKT1P31749 480 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 SSTR3P32745 418 aaPredicted RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 WDR72Q3MJ13 1102 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 PPHLN1Q8NEY8 458 aaKnown RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 CDCA5Q96FF9 252 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 PARVAQ9NVD7 372 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 POLLQ9UGP5 575 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 SYNCRIPO60506 623 aaKnown RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 ROR1Q01973 937 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 RBBP7Q16576 425 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 CYP4F22Q6NT55 531 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 LRRC71Q8N4P6 559 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 TAAR1Q96RJ0 339 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 EVA1BQ9NVM1 165 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 RAB23Q9ULC3 237 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 RASGRF2O14827 1237 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 CDC25BP30305 580 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 TSNAXIP1Q2TAA8 658 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 SLC7A14Q8TBB6 771 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 CSGALNACT1Q8TDX6 532 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 MRFAP1L1Q96HT8 127 aa14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 PRMT6Q96LA8 375 aaPredicted RBP14.4□□□□□ -0.1
PDGFRB-201ENST00000261799 UBA6A0AVT1 1052 aaPredicted RBP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 ADM5C9JUS6 153 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 AP3B1O00203 1094 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 KIF3CO14782 793 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 ZC3H11AO75152 810 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 MBL2P11226 248 aaPredicted RBP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 NLRP11P59045 1033 aaKnown RBP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 GUCY2DQ02846 1103 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 ENGASEQ8NFI3 743 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 GIPC2Q8TF65 315 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 SKA1Q96BD8 255 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 TEX12Q9BXU0 123 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 TUBE1Q9UJT0 475 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 DSEQ9UL01 958 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 MADDQ8WXG6 1647 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 SETD1BQ9UPS6 1966 aaKnown RBP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 TXNDC9O14530 226 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 EIF3DO15371 548 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 ARL4CP56559 192 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 PDIA5Q14554 519 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 LBRQ14739 615 aaKnown RBP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 HP1BP3Q5SSJ5 553 aaPredicted RBP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 ATPAF2Q8N5M1 289 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 CABS1Q96KC9 395 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 RIT2Q99578 217 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 CATSPERBQ9H7T0 1116 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 KANSL3Q9P2N6 904 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 ARHGAP10A1A4S6 786 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 TBKBP1A7MCY6 615 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 SLC16A3O15427 465 aaKnown RBP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 APBA1Q02410 837 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 RESTQ13127 1097 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 TMC7Q7Z402 723 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 PPP1R2P1Q96PQ5 205 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 SPATA16Q9BXB7 569 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 IGFLR1Q9H665 355 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 COG4Q9H9E3 785 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 HSPBP1Q9NZL4 362 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 PCSK1NQ9UHG2 260 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 UBQLN1Q9UMX0 589 aaKnown RBP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 A0A087WWV3 80 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 IFNAR2P48551 515 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 FBXO16Q8IX29 292 aaPredicted RBP14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 OXER1Q8TDS5 423 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 SENP1Q9P0U3 644 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 RNF14Q9UBS8 474 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 RCOR1Q9UKL0 485 aa14.39□□□□□ -0.11
PDGFRB-201ENST00000261799 STRNO43815 780 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 ZMYND10O75800 440 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 PDGFRBP09619 1106 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 RAB27AP51159 221 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 CDH18Q13634 790 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 ATP6V0D2Q8N8Y2 350 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 EPS15L1Q9UBC2 864 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 H0Y626 953 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 ANP32DO95626 131 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 FTCDO95954 541 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 PGK2P07205 417 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 LMNTD2Q8IXW0 634 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 NKX2-3Q8TAU0 364 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 NUP85Q9BW27 656 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 SUN2Q9UH99 717 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 SYF2O95926 243 aaKnown RBP14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 CKBP12277 381 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 SLC11A2P49281 568 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 NBPF12Q5TAG4 269 aaPredicted RBP14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 ABI2Q9NYB9 513 aaPredicted RBP14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 CABYRO75952 493 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 RPL10AP62906 217 aaKnown RBP14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 NOGQ13253 232 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 EMSYQ7Z589 1322 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 XYLBO75191 536 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 PDHBP11177 359 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 RASA1P20936 1047 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 KLRC2P26717 231 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms