RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 TRIM56Q9BRZ2 755 aaKnown RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 TSSK1BQ9BXA7 367 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 METTL5Q9NRN9 209 aaKnown RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 KLHL11Q9NVR0 708 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 TRAF3IP3Q9Y228 551 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 APOBEC2Q9Y235 224 aaKnown RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 HNRNPCL1O60812 293 aaKnown RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 FGFR2P21802 821 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 PTENP60484 403 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 ABCB5Q2M3G0 1257 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 KLHL38Q2WGJ6 581 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 MIIPQ5JXC2 388 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 ERICH1Q86X53 443 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 SUDS3Q9H7L9 328 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 MARCOQ9UEW3 520 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 ZNF711Q9Y462 761 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 O00370 1275 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 DNM1LO00429 736 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 CASP4P49662 377 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 NOP14P78316 857 aaKnown RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 THOC5Q13769 683 aaKnown RBP17.21■□□□□ 0.35
SREBF1-201ENST00000261646 KCNV1Q6PIU1 500 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 CCDC125Q86Z20 511 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 RHOT1Q8IXI2 618 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 TMEM237Q96Q45 408 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 DCLRE1BQ9H816 532 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 NEU2Q9Y3R4 380 aa17.21■□□□□ 0.35
SREBF1-201ENST00000261646 MMEL1Q495T6 779 aa17.21■□□□□ 0.34
SREBF1-201ENST00000261646 ZNF394Q53GI3 561 aa17.21■□□□□ 0.34
SREBF1-201ENST00000261646 ATP11CQ8NB49 1132 aa17.21■□□□□ 0.34
SREBF1-201ENST00000261646 JDP2Q8WYK2 163 aa17.21■□□□□ 0.34
SREBF1-201ENST00000261646 MTBPQ96DY7 904 aa17.21■□□□□ 0.34
SREBF1-201ENST00000261646 RBM41Q96IZ5 413 aaKnown RBP17.21■□□□□ 0.34
SREBF1-201ENST00000261646 TLR3O15455 904 aaKnown RBP17.2■□□□□ 0.34
SREBF1-201ENST00000261646 SHBGP04278 402 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 AP3B2Q13367 1082 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 LAMB3Q13751 1172 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 SBK1Q52WX2 424 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 THEMIS2Q5TEJ8 643 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 AEBP2Q6ZN18 517 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-201ENST00000261646 NLRP9Q7RTR0 991 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 LRRC43Q8N309 656 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-201ENST00000261646 SRRM3A6NNA2 597 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-201ENST00000261646 KLRC4O43908 158 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 EIF2AK1Q9BQI3 630 aaKnown RBP17.2■□□□□ 0.34
SREBF1-201ENST00000261646 MIS12Q9H081 205 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 AIPL1Q9NZN9 384 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 SNX3O60493 162 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 DNAJC6O75061 913 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 BMP3P12645 472 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 KCTD6Q8NC69 237 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 PGM2Q96G03 612 aa17.2■□□□□ 0.34
SREBF1-201ENST00000261646 INPP4AQ96PE3 977 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-201ENST00000261646 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
SREBF1-201ENST00000261646 SSTR3P32745 418 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-201ENST00000261646 INTS5Q6P9B9 1019 aaKnown RBP17.19■□□□□ 0.34
SREBF1-201ENST00000261646 PADI6Q6TGC4 694 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 CRELD2Q6UXH1 353 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-201ENST00000261646 CYFIP1Q7L576 1253 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 PCGF5Q86SE9 256 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 RHPN2Q8IUC4 686 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 NUDCD3Q8IVD9 361 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 BTBD6Q96KE9 485 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 SCYL1Q96KG9 808 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 ZSWIM1Q9BR11 485 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 RANBP17Q9H2T7 1088 aaKnown RBP17.19■□□□□ 0.34
SREBF1-201ENST00000261646 MAD2L2Q9UI95 211 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 TTLL3Q9Y4R7 772 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 PEAK1Q9H792 1746 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 AKR1B1P15121 316 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 CYP11B2P19099 503 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 SERPINB3P29508 390 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 ZNF354CQ86Y25 554 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 ICA1LQ8NDH6 482 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 MTRQ99707 1265 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 A1CFQ9NQ94 594 aaKnown RBP17.19■□□□□ 0.34
SREBF1-201ENST00000261646 SCINQ9Y6U3 715 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 SLIT1O75093 1534 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 WDR64B1ANS9 1081 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 H3BRJ5 948 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 FOXN3O00409 490 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-201ENST00000261646 SLC16A3O15427 465 aaKnown RBP17.19■□□□□ 0.34
SREBF1-201ENST00000261646 RPS6KA4O75676 772 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 ACADSP16219 412 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 HIF1AQ16665 826 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 BZW1Q7L1Q6 419 aaKnown RBP17.19■□□□□ 0.34
SREBF1-201ENST00000261646 SMYD2Q9NRG4 433 aa17.19■□□□□ 0.34
SREBF1-201ENST00000261646 ALDH18A1P54886 795 aaKnown RBP17.18■□□□□ 0.34
SREBF1-201ENST00000261646 EAPPQ56P03 285 aaPredicted RBP17.18■□□□□ 0.34
SREBF1-201ENST00000261646 ANO5Q75V66 913 aa17.18■□□□□ 0.34
SREBF1-201ENST00000261646 APTXQ7Z2E3 356 aaKnown RBP17.18■□□□□ 0.34
SREBF1-201ENST00000261646 SLC16A4O15374 487 aa17.18■□□□□ 0.34
SREBF1-201ENST00000261646 FOXP2O15409 715 aa17.18■□□□□ 0.34
SREBF1-201ENST00000261646 RIPK2O43353 540 aa17.18■□□□□ 0.34
SREBF1-201ENST00000261646 KIF22Q14807 665 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms