RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 NCKAP1LP55160 1127 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 KCNA1Q09470 495 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 CDKAL1Q5VV42 579 aa20.42■□□□□ 0.86
COL4A3BP-201ENST00000261415 GAS2O43903 313 aaKnown RBP20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 ARL2P36404 184 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 CKAP4Q07065 602 aaKnown RBP20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 KNOP1Q1ED39 458 aaKnown RBP20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 FOXR2Q6PJQ5 311 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 PPFIBP1Q86W92 1011 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 CSGALNACT2Q8N6G5 542 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 DNAJC5GQ8N7S2 189 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 RUBCNQ92622 972 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 ST6GALNAC4Q9H4F1 302 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 PCDHB13Q9Y5F0 798 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 ZMYM2Q9UBW7 1377 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 CCDC169A6NNP5 214 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 SLC16A4O15374 487 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 PGK1P00558 417 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 MYL3P08590 195 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 IGBP1P78318 339 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 SLMAPQ14BN4 828 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 NAA35Q5VZE5 725 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 HAUS6Q7Z4H7 955 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 KSR1Q8IVT5 923 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 FUKQ8N0W3 1084 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 SLC17A8Q8NDX2 589 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 SPIRE2Q8WWL2 714 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 CCDC51Q96ER9 411 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 IFT74Q96LB3 600 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 TSG101Q99816 390 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 KMT5AQ9NQR1 393 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 PTCH2Q9Y6C5 1203 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 DNAH12Q6ZR08 3092 aa20.41■□□□□ 0.86
COL4A3BP-201ENST00000261415 C22orf31O95567 290 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 INHAP05111 366 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 GRK4P32298 578 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 ALCAMQ13740 583 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 PTPN21Q16825 1174 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 KIAA0753Q2KHM9 967 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 ALS2CLQ60I27 953 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 CCDC70Q6NSX1 233 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 LRRC71Q8N4P6 559 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 ASAP3Q8TDY4 903 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 NTPCRQ9BSD7 190 aaKnown RBP20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 KIFC3Q9BVG8 833 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 SPC25Q9HBM1 224 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 XPNPEP3Q9NQH7 507 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 IRAK4Q9NWZ3 460 aa20.4■□□□□ 0.86
COL4A3BP-201ENST00000261415 EME2A4GXA9 379 aaPredicted RBP20.39■□□□□ 0.86
COL4A3BP-201ENST00000261415 GLRA2P23416 452 aa20.39■□□□□ 0.86
COL4A3BP-201ENST00000261415 NKX3-2P78367 333 aa20.39■□□□□ 0.86
COL4A3BP-201ENST00000261415 PURAQ00577 322 aaKnown RBP20.39■□□□□ 0.86
COL4A3BP-201ENST00000261415 MKRN4PQ13434 485 aaPredicted RBP20.39■□□□□ 0.86
COL4A3BP-201ENST00000261415 MFSD10Q14728 455 aa20.39■□□□□ 0.86
COL4A3BP-201ENST00000261415 GNASQ5JWF2 1037 aa20.39■□□□□ 0.86
COL4A3BP-201ENST00000261415 TMEM161BQ8NDZ6 487 aa20.39■□□□□ 0.86
COL4A3BP-201ENST00000261415 ZBTB10Q96DT7 871 aa20.39■□□□□ 0.86
COL4A3BP-201ENST00000261415 ADGRA3Q8IWK6 1321 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 ADAMTS4O75173 837 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 GTF2BQ00403 316 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 GRIK4Q16099 956 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 IER5Q5VY09 327 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 CCDC121Q6ZUS5 278 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 TRAPPC11Q7Z392 1133 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 EEF2KMTQ96G04 330 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 SCLT1Q96NL6 688 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 RUFY1Q96T51 708 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 THAP9Q9H5L6 903 aa20.39■□□□□ 0.85
COL4A3BP-201ENST00000261415 HAS3O00219 553 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 NR1I3Q14994 352 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 SLC5A9Q2M3M2 681 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 PPP4R3CPQ6ZMV5 832 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 FAM228AQ86W67 206 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 ZNF473Q8WTR7 871 aaKnown RBP20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 NOC3LQ8WTT2 800 aaKnown RBP20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 LMBR1Q8WVP7 490 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 TYW1Q9NV66 732 aaKnown RBP20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 TRAF3IP3Q9Y228 551 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 PDXKO00764 312 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 KLRC1P26715 233 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 PSEN2P49810 448 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 EMC10Q5UCC4 262 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 EFCAB12Q6NXP0 572 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 IRF2BP1Q8IU81 584 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 RETREG2Q8NC44 543 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 KATNAL1Q9BW62 490 aa20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 TPX2Q9ULW0 747 aaKnown RBP20.38■□□□□ 0.85
COL4A3BP-201ENST00000261415 MAGEB2O15479 319 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 KPNA6O60684 536 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 NAMPTP43490 491 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 PDCLQ13371 301 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 EDRF1Q3B7T1 1238 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 IQCEQ6IPM2 695 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 LRRC55Q6ZSA7 311 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 METTL13Q8N6R0 699 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 AENQ8WTP8 325 aaKnown RBP20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 PRPF31Q8WWY3 499 aaKnown RBP20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 PSPC1Q8WXF1 523 aaKnown RBP20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 IKZF4Q9H2S9 585 aa20.37■□□□□ 0.85
COL4A3BP-201ENST00000261415 ARHGAP28Q9P2N2 729 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms