RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CKAP2Q8WWK9 683 aa17.02■□□□□ 0.32
LMNB1-201ENST00000261366 FAM84AQ96KN4 292 aa17.02■□□□□ 0.32
LMNB1-201ENST00000261366 TRPC5Q9UL62 973 aaPredicted RBP17.02■□□□□ 0.32
LMNB1-201ENST00000261366 HIP1RO75146 1068 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 SMNDC1O75940 238 aaKnown RBP eCLIP17.02■□□□□ 0.31
LMNB1-201ENST00000261366 EEF2P13639 858 aaKnown RBP17.02■□□□□ 0.31
LMNB1-201ENST00000261366 PCK1P35558 622 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 RAD23BP54727 409 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 GABPAQ06546 454 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 NFIAQ12857 509 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 BIRC2Q13490 618 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 GRIPAP1Q4V328 841 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 SLFN13Q68D06 897 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 MIS18BP1Q6P0N0 1132 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 ZNF483Q8TF39 744 aaPredicted RBP17.02■□□□□ 0.31
LMNB1-201ENST00000261366 SAAL1Q96ER3 474 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 BATF3Q9NR55 127 aa17.02■□□□□ 0.31
LMNB1-201ENST00000261366 ONECUT3O60422 494 aaPredicted RBP17.01■□□□□ 0.31
LMNB1-201ENST00000261366 EYA4O95677 639 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 BCRP11274 1271 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 NOVP48745 357 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 PPP3CAQ08209 521 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 BFSP1Q12934 665 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 NOP9Q86U38 636 aaKnown RBP17.01■□□□□ 0.31
LMNB1-201ENST00000261366 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
LMNB1-201ENST00000261366 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.01■□□□□ 0.31
LMNB1-201ENST00000261366 GGA1Q9UJY5 639 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 NAALADL1Q9UQQ1 740 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 TP73O15350 636 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 PIAS1O75925 651 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 BMT2Q1RMZ1 405 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 GNPTABQ3T906 1256 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 MFSD5Q6N075 450 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 GBP7Q8N8V2 638 aaPredicted RBP17.01■□□□□ 0.31
LMNB1-201ENST00000261366 FBF1Q8TES7 1133 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 HERPUD2Q9BSE4 406 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 FRMPD4Q14CM0 1322 aa17.01■□□□□ 0.31
LMNB1-201ENST00000261366 TNRC6CQ9HCJ0 1690 aaKnown RBP17■□□□□ 0.31
LMNB1-201ENST00000261366 RASA4BC9J798 803 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 RASA4O43374 803 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 GJB6O95452 261 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 CBX6O95503 412 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 SIX1Q15475 284 aaPredicted RBP17■□□□□ 0.31
LMNB1-201ENST00000261366 TNFAIP8L3Q5GJ75 292 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 NAF1Q96HR8 494 aaKnown RBP17■□□□□ 0.31
LMNB1-201ENST00000261366 VAV3Q9UKW4 847 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 IGKV6D-41A0A0C4DH26 115 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 POC1B-GALNT4F8VUJ3 575 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 GDF11O95390 407 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 KIF22Q14807 665 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 C11orf63Q6NUN7 778 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 ASRGL1Q7L266 308 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 CROCCP2Q86T23 111 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 NAP1L4Q99733 375 aaKnown RBP17■□□□□ 0.31
LMNB1-201ENST00000261366 WRAP73Q9P2S5 460 aaPredicted RBP17■□□□□ 0.31
LMNB1-201ENST00000261366 POLLQ9UGP5 575 aa17■□□□□ 0.31
LMNB1-201ENST00000261366 TTC4O95801 387 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 HSPA6P17066 643 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 SSTR3P32745 418 aaPredicted RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 RWDD2BP57060 319 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 TRMT10CQ7L0Y3 403 aaKnown RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 ZNF720Q7Z2F6 126 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 C4orf33Q8N1A6 199 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 TTC8Q8TAM2 541 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 CCDC127Q96BQ5 260 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 CBWD1Q9BRT8 395 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 TMEM109Q9BVC6 243 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 OLFML3Q9NRN5 406 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 NINJ2Q9NZG7 142 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 ANAPC5Q9UJX4 755 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 R3HDM2Q9Y2K5 976 aaKnown RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 THSD7AQ9UPZ6 1657 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 SLITRK3O94933 977 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 UNC5CO95185 931 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 CFBP00751 764 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 ALAS1P13196 640 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 GM2AP17900 193 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 ADRA2BP18089 450 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 EPHB2P29323 1055 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 SSR1P43307 286 aaKnown RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 ERFP50548 548 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 GRIK3Q13003 919 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 SLC5A5Q92911 643 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 SERPINB12Q96P63 405 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 ROPN1BQ9BZX4 212 aaPredicted RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 ROPN1Q9HAT0 212 aaPredicted RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 SPATS2LQ9NUQ6 558 aaKnown RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 ZBTB21Q9ULJ3 1066 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 PCDHAC2Q9Y5I4 1007 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 MAST2Q6P0Q8 1798 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 CYP3A7-CYP3A51PA0A087WV96 503 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 K7ENM7 598 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 ENTPD5O75356 428 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 TAC1P20366 129 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 CYP3A7P24462 503 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 SARNPP82979 210 aaKnown RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 MTM1Q13496 603 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms