RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 AGPAT1Q99943 283 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 NIFKQ9BYG3 293 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 ST6GALNAC4Q9H4F1 302 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 RPF1Q9H9Y2 349 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 EHD2Q9NZN4 543 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 B4GALT5O43286 388 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 TOM1L1O75674 476 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 SEC31AO94979 1220 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 FTLP02792 175 aaPredicted RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 C6orf222P0C671 652 aaPredicted RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 FGFR4P22455 802 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 SLC26A2P50443 739 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 FAM193AP78312 1265 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 KIZQ2M2Z5 673 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 RGMBQ6NW40 437 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 SLC39A4Q6P5W5 647 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 CATSPER4Q7RTX7 472 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 KLHL7Q8IXQ5 586 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 GPR161Q8N6U8 529 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZNF653Q96CK0 615 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 CPB2Q96IY4 423 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 MAML3Q96JK9 1138 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 MMS19Q96T76 1030 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 PTPN18Q99952 460 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 NTPCRQ9BSD7 190 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZFYVE28Q9HCC9 887 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 SIX2Q9NPC8 291 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 P4HA2O15460 535 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 ATMINO43313 823 aaPredicted RBP9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZEB2O60315 1214 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 ATG7O95352 703 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 SGPL1O95470 568 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 TNFSF9P41273 254 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 MOGSQ13724 837 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 MESDQ14696 234 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 NFIL3Q16649 462 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 CFAP221Q4G0U5 840 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 NAA35Q5VZE5 725 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 SLC47A2Q86VL8 602 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 SLC30A5Q8TAD4 765 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 SEMA4DQ92854 862 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 SELENOOQ9BVL4 669 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 PARD6BQ9BYG5 372 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 MTMR12Q9C0I1 747 aa9.37□□□□□ -0.91
CALCOCO2-201ENST00000258947 MANSC4A6NHS7 340 aaPredicted RBP9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 DDX3XO00571 662 aaKnown RBP eCLIP9.36□□□□□ -0.916e-13■■■■□ 20.1
CALCOCO2-201ENST00000258947 RFX1P22670 979 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 ARL2P36404 184 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 RTP1P59025 263 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 NCOA4Q13772 614 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 C10orf76Q5T2E6 689 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 PLPPR4Q7Z2D5 763 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 CEP120Q8N960 986 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 COG1Q8WTW3 980 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 RABGGTAQ92696 567 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 BORCS6Q96GS4 357 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 ANKRD36BP1Q96IX9 119 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 OSBPL9Q96SU4 736 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 AMFRQ9UKV5 643 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 MYH9P35579 1960 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 DNAJC25-GNG10A0A024R161 153 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 ANO9A1A5B4 782 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 THAP12O43422 761 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 PPFIA4O75335 1185 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 STBD1O95210 358 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 GPC3P51654 580 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 BEX3Q00994 111 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 RNF10Q8N5U6 811 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 NOA1Q8NC60 698 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 MS4A14Q96JA4 679 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 SYNCQ9H7C4 482 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 RRP9O43818 475 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 SMPD1P17405 629 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 NSFP46459 744 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 ARHGAP1Q07960 439 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 C2CD6Q53TS8 623 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 CST9Q5W186 159 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 TAS1R3Q7RTX0 852 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 SESTD1Q86VW0 696 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 C12orf56Q8IXR9 622 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 TMC2Q8TDI7 906 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 STRA6Q9BX79 667 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 MAF1Q9H063 256 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 OSGEPQ9NPF4 335 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 SNX12Q9UMY4 172 aa9.36□□□□□ -0.91
CALCOCO2-201ENST00000258947 SBF1O95248 1867 aa9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 TTLL13PA6NNM8 815 aa9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 IGF2BP3O00425 579 aaKnown RBP eCLIP9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 SOCS7O14512 581 aa9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 MAGEB2O15479 319 aa9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 GAS2O43903 313 aaKnown RBP9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 MYCP01106 439 aaPredicted RBP9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 CLCN6P51797 869 aa9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 NOP14P78316 857 aaKnown RBP9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 GRIK4Q16099 956 aa9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 DUOXA2Q1HG44 320 aa9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZNF792Q3KQV3 632 aa9.35□□□□□ -0.91
CALCOCO2-201ENST00000258947 ZNF484Q5JVG2 852 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms