RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 CCDC63Q8NA47 563 aa14.46□□□□□ -0.09
VHL-201ENST00000256474 CDC42EP4Q9H3Q1 356 aaKnown RBP14.46□□□□□ -0.09
VHL-201ENST00000256474 INTUQ9ULD6 942 aa14.46□□□□□ -0.09
VHL-201ENST00000256474 PPFIA2O75334 1257 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 CPP00450 1065 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 CYP11B1P15538 503 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 CNGA1P29973 690 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 PSMC4P43686 418 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 EIF3BP55884 814 aaKnown RBP14.45□□□□□ -0.1
VHL-201ENST00000256474 FOXR2Q6PJQ5 311 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 DPH6Q7L8W6 267 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 PARP9Q8IXQ6 854 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 FNBP1Q96RU3 617 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 MKNK1Q9BUB5 465 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 IDI2Q9BXS1 227 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 ZDHHC18Q9NUE0 388 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 DNAH12Q6ZR08 3092 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 RPTORQ8N122 1335 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 TMEM120BA0PK00 339 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 FSBPO95073 299 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 SCP2P22307 547 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 RRM1P23921 792 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 STX2P32856 288 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 SMTNP53814 917 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 PPP2R5CQ13362 524 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 TMED2Q15363 201 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 FAM129AQ9BZQ8 928 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 TMEM206Q9H813 350 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 CES2O00748 559 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 RGL2O15211 777 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 CDC25CP30307 473 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 GBP2P32456 591 aaPredicted RBP14.45□□□□□ -0.1
VHL-201ENST00000256474 DYNLT1P63172 113 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 DHX34Q14147 1143 aaKnown RBP14.45□□□□□ -0.1
VHL-201ENST00000256474 MTERF2Q49AM1 385 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 ARHGEF16Q5VV41 709 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 RMDN3Q96TC7 470 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 GRHL1Q9NZI5 618 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 SEL1LQ9UBV2 794 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 SEPT9Q9UHD8 586 aaPredicted RBP14.45□□□□□ -0.1
VHL-201ENST00000256474 ODF2LQ9ULJ1 636 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 STK24Q9Y6E0 443 aa14.45□□□□□ -0.1
VHL-201ENST00000256474 FAM187AA6NFU0 413 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 RIPK2O43353 540 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 HOXA7P31268 230 aaPredicted RBP14.44□□□□□ -0.1
VHL-201ENST00000256474 DMP1Q13316 513 aaPredicted RBP14.44□□□□□ -0.1
VHL-201ENST00000256474 TCHPQ9BT92 498 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 ANAPC5Q9UJX4 755 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 L3MBTL1Q9Y468 752 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 TELO2Q9Y4R8 837 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 WDR91A4D1P6 747 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 MIF4GDA9UHW6 222 aaKnown RBP14.44□□□□□ -0.1
VHL-201ENST00000256474 BRAFP15056 766 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 ATF2P15336 505 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 ITGA8P53708 1063 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 POU5F1Q01860 360 aaKnown RBP14.44□□□□□ -0.1
VHL-201ENST00000256474 FUKQ8N0W3 1084 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 TPX2Q9ULW0 747 aaKnown RBP14.44□□□□□ -0.1
VHL-201ENST00000256474 KRT10P13645 584 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 PLS3P13797 630 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 CHRNB2P17787 502 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 RPS6P62753 249 aaKnown RBP14.44□□□□□ -0.1
VHL-201ENST00000256474 FMO1Q01740 532 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 ATP13A4Q4VNC1 1196 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 C6orf118Q5T5N4 469 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 C10orf88Q9H8K7 445 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 CNOT10Q9H9A5 744 aaKnown RBP14.44□□□□□ -0.1
VHL-201ENST00000256474 GABBR1Q9UBS5 961 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 R3HDM2Q9Y2K5 976 aaKnown RBP14.44□□□□□ -0.1
VHL-201ENST00000256474 BRCA2P51587 3418 aa14.44□□□□□ -0.1
VHL-201ENST00000256474 VIL1P09327 827 aaKnown RBP14.43□□□□□ -0.1
VHL-201ENST00000256474 KIF22Q14807 665 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 KRT39Q6A163 491 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 KIFAP3Q92845 792 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 ZKSCAN4Q969J2 545 aaPredicted RBP14.43□□□□□ -0.1
VHL-201ENST00000256474 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
VHL-201ENST00000256474 TRIM33Q9UPN9 1127 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 TMX2Q9Y320 296 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 NCANO14594 1321 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 CCT8L1PA6NM43 557 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 YDJCA8MPS7 323 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 PODXLO00592 558 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 CHUKO15111 745 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 RALAP11233 206 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 NSFP46459 744 aaKnown RBP14.43□□□□□ -0.1
VHL-201ENST00000256474 SPP2Q13103 211 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 TKFCQ3LXA3 575 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 ERMARDQ5T6L9 678 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 TMEM270Q6UE05 265 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 TAOK1Q7L7X3 1001 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.43□□□□□ -0.1
VHL-201ENST00000256474 N4BP2L2Q92802 583 aaPredicted RBP14.43□□□□□ -0.1
VHL-201ENST00000256474 SERPINA10Q9UK55 444 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 LRRIQ4A6NIV6 560 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 ADCY2Q08462 1091 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 NAA25Q14CX7 972 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 TMEM132AQ24JP5 1023 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 SWSAP1Q6NVH7 229 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 SV2AQ7L0J3 742 aa14.43□□□□□ -0.1
VHL-201ENST00000256474 LMO3Q8TAP4 145 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms