RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 DGKIO75912 1065 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 NR3C1P04150 777 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 ITGA4P13612 1032 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 RPL13P26373 211 aaKnown RBP15.38■□□□□ 0.05
VPS25-201ENST00000253794 TYRO3Q06418 890 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 PRPF38BQ5VTL8 546 aaKnown RBP15.38■□□□□ 0.05
VPS25-201ENST00000253794 ALKAL1Q6UXT8 129 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 HERC6Q8IVU3 1022 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 TDHQ8IZJ6 230 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 XXYLT1Q8NBI6 393 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 NELFBQ8WX92 580 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 MED15Q96RN5 788 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 TSPAN18Q96SJ8 248 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 TSG101Q99816 390 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 CCDC94Q9BW85 323 aaPredicted RBP15.38■□□□□ 0.05
VPS25-201ENST00000253794 RSAD1Q9HA92 442 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 PLEKHA5Q9HAU0 1116 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 SNTG2Q9NY99 539 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 HES2Q9Y543 173 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 PTPRSQ13332 1948 aa15.38■□□□□ 0.05
VPS25-201ENST00000253794 TTC26A0AVF1 554 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 SYCE3A1L190 88 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 MEIS3P2A8K0S8 358 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 CLIC2O15247 247 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 MEFVO15553 781 aaPredicted RBP15.37■□□□□ 0.05
VPS25-201ENST00000253794 RECQL4O94761 1208 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 CCDC192P0DO97 292 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 ATP2A2P16615 1042 aaKnown RBP15.37■□□□□ 0.05
VPS25-201ENST00000253794 NR2F2P24468 414 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 FKBP3Q00688 224 aaKnown RBP15.37■□□□□ 0.05
VPS25-201ENST00000253794 ENPEPQ07075 957 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 CLLU1OSQ5K130 101 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 ANKRD40Q6AI12 368 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 LRRC55Q6ZSA7 311 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 BRSK2Q8IWQ3 736 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 CD302Q8IX05 232 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 TMEM192Q8IY95 271 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 THNSL1Q8IYQ7 743 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 SP7Q8TDD2 431 aaPredicted RBP15.37■□□□□ 0.05
VPS25-201ENST00000253794 SNX27Q96L92 541 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 ACAP3Q96P50 834 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 DUSP9Q99956 384 aaKnown RBP15.37■□□□□ 0.05
VPS25-201ENST00000253794 MKNK1Q9BUB5 465 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 TMEM117Q9H0C3 514 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 TOPORSQ9NS56 1045 aaPredicted RBP15.37■□□□□ 0.05
VPS25-201ENST00000253794 CNTN3Q9P232 1028 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 LRFN2Q9ULH4 789 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 CTNND2Q9UQB3 1225 aa15.37■□□□□ 0.05
VPS25-201ENST00000253794 TRIM49BA6NDI0 452 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 OFD1O75665 1012 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 KCNE1P15382 129 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 TNFSF9P41273 254 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 MATR3P43243 847 aaKnown RBP eCLIP15.36■□□□□ 0.05
VPS25-201ENST00000253794 YARSP54577 528 aaKnown RBP15.36■□□□□ 0.05
VPS25-201ENST00000253794 ENOX2Q16206 610 aaKnown RBP15.36■□□□□ 0.05
VPS25-201ENST00000253794 SLC10A6Q3KNW5 377 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 ZBTB41Q5SVQ8 909 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 KLHL10Q6JEL2 608 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 GLB1LQ6UWU2 654 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 CHRDL2Q6WN34 429 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 GSTCDQ8NEC7 633 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 ZSWIM2Q8NEG5 633 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 LPPQ93052 612 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 SAAL1Q96ER3 474 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 MFSD14AQ96MC6 490 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 CEP63Q96MT8 703 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 CASD1Q96PB1 797 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 BPIFA3Q9BQP9 254 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 PCIF1Q9H4Z3 704 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 ASB7Q9H672 318 aa15.36■□□□□ 0.05
VPS25-201ENST00000253794 RALGAPA2Q2PPJ7 1873 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 ARL5CA6NH57 179 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 ZNF233A6NK53 670 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 CETN3O15182 167 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 SLC16A3O15427 465 aaKnown RBP15.35■□□□□ 0.05
VPS25-201ENST00000253794 EXOC3O60645 756 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 IL18RAPO95256 599 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 CAVIN2O95810 425 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 HARSP12081 509 aaKnown RBP15.35■□□□□ 0.05
VPS25-201ENST00000253794 AKAP5P24588 427 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 ACOT2P49753 483 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 CYP2J2P51589 502 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 ADAM9Q13443 819 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 SNRNP35Q16560 246 aaKnown RBP15.35■□□□□ 0.05
VPS25-201ENST00000253794 C11orf57Q6ZUT1 292 aaPredicted RBP15.35■□□□□ 0.05
VPS25-201ENST00000253794 CBWD2Q8IUF1 395 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 CMTR2Q8IYT2 770 aaKnown RBP15.35■□□□□ 0.05
VPS25-201ENST00000253794 RAD9AQ99638 391 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 FAM213AQ9BRX8 229 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 MRPL9Q9BYD2 267 aaKnown RBP15.35■□□□□ 0.05
VPS25-201ENST00000253794 RPF1Q9H9Y2 349 aaKnown RBP15.35■□□□□ 0.05
VPS25-201ENST00000253794 DERAQ9Y315 318 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.35■□□□□ 0.05
VPS25-201ENST00000253794 LAMA2P24043 3122 aaKnown RBP15.35■□□□□ 0.05
VPS25-201ENST00000253794 LAMA3Q16787 3333 aa15.35■□□□□ 0.05
VPS25-201ENST00000253794 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.34■□□□□ 0.05
VPS25-201ENST00000253794 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.34■□□□□ 0.05
VPS25-201ENST00000253794 PTGESO14684 152 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 AKAP3O75969 853 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 CXCL8P10145 99 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms