RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CDHR5Q9HBB8 845 aa14.08□□□□□ -0.16
LSM8-201ENST00000249299 TAB2Q9NYJ8 693 aa14.08□□□□□ -0.16
LSM8-201ENST00000249299 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.08□□□□□ -0.16
LSM8-201ENST00000249299 SIP14410 1827 aa14.08□□□□□ -0.16
LSM8-201ENST00000249299 GOLGA6L6A8MZA4 724 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 TISP43B9A030 160 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 B4GALT5O43286 388 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 RPS6KA5O75582 802 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 AFPP02771 609 aaKnown RBP14.07□□□□□ -0.16
LSM8-201ENST00000249299 EDN1P05305 212 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 ADRB2P07550 413 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 CKBP12277 381 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 SELPP16109 830 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 MATR3P43243 847 aaKnown RBP eCLIP14.07□□□□□ -0.16
LSM8-201ENST00000249299 UBXN1Q04323 297 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 CYP24A1Q07973 514 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 TMEM62Q0P6H9 643 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 CETN1Q12798 172 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 KCNH2Q12809 1159 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 TRIM14Q14142 442 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 TMEM132AQ24JP5 1023 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 FIGNQ5HY92 759 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 FBXO47Q5MNV8 452 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 SPECC1LQ69YQ0 1117 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 NECAB2Q7Z6G3 386 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 VSTM4Q8IW00 320 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 BRSK2Q8IWQ3 736 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 PARD3BQ8TEW8 1205 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 TMEM40Q8WWA1 233 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 WNT8BQ93098 351 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 NUP58Q9BVL2 599 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 TMEM121BQ9BXQ6 578 aaPredicted RBP14.07□□□□□ -0.16
LSM8-201ENST00000249299 MCOLN1Q9GZU1 580 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 CDT1Q9H211 546 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 VPS16Q9H269 839 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 C11orf49Q9H6J7 331 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 RYDENQ9NUL5 291 aaKnown RBP14.07□□□□□ -0.16
LSM8-201ENST00000249299 INTS13Q9NVM9 706 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 ANKFY1Q9P2R3 1169 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 CPSF3Q9UKF6 684 aaKnown RBP14.07□□□□□ -0.16
LSM8-201ENST00000249299 GINS2Q9Y248 185 aa14.07□□□□□ -0.16
LSM8-201ENST00000249299 IL18RAPO95256 599 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 MYCP01106 439 aaPredicted RBP14.06□□□□□ -0.16
LSM8-201ENST00000249299 SKIP12755 728 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 GRM5P41594 1212 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 CRELD2Q6UXH1 353 aaPredicted RBP14.06□□□□□ -0.16
LSM8-201ENST00000249299 FAM228AQ86W67 206 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 NT5DC4Q86YG4 428 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 CBWD2Q8IUF1 395 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 CREBRFQ8IUR6 639 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 PPP1R13LQ8WUF5 828 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 ZNF668Q96K58 619 aaPredicted RBP14.06□□□□□ -0.16
LSM8-201ENST00000249299 ZBTB45Q96K62 511 aaPredicted RBP14.06□□□□□ -0.16
LSM8-201ENST00000249299 FAM213AQ9BRX8 229 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 EDEM3Q9BZQ6 932 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 HAPLN2Q9GZV7 340 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 ASB7Q9H672 318 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 RBAKQ9NYW8 714 aaPredicted RBP14.06□□□□□ -0.16
LSM8-201ENST00000249299 NOC2LQ9Y3T9 749 aaKnown RBP14.06□□□□□ -0.16
LSM8-201ENST00000249299 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.06□□□□□ -0.163e-9■□□□□ 10.3
LSM8-201ENST00000249299 EVPLQ92817 2033 aa14.06□□□□□ -0.16
LSM8-201ENST00000249299 RAB27AP51159 221 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 GSDMDP57764 484 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 ZNF618Q5T7W0 954 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 EEF1DP3Q658K8 133 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 TRAF7Q6Q0C0 670 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 HACE1Q8IYU2 909 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 SAAL1Q96ER3 474 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 FNBP1Q96RU3 617 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 PPP1R16BQ96T49 567 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 CCDC94Q9BW85 323 aaPredicted RBP14.05□□□□□ -0.16
LSM8-201ENST00000249299 FTHL17Q9BXU8 183 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 ERVK-5Q9HDB9 667 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 ST3GAL5Q9UNP4 418 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 PIN4Q9Y237 131 aaKnown RBP14.05□□□□□ -0.16
LSM8-201ENST00000249299 USP20Q9Y2K6 914 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 COQ4Q9Y3A0 265 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 BOLA1Q9Y3E2 137 aa14.05□□□□□ -0.16
LSM8-201ENST00000249299 ZNF623O75123 536 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 CSDE1O75534 798 aaKnown RBP14.04□□□□□ -0.16
LSM8-201ENST00000249299 ZSCAN20P17040 1043 aaPredicted RBP14.04□□□□□ -0.16
LSM8-201ENST00000249299 FMO5P49326 533 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 PAK2Q13177 524 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 LPIN1Q14693 890 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 TCERG1LQ5VWI1 586 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 LRRC8DQ7L1W4 858 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 WDR49Q8IV35 697 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 RDH13Q8NBN7 331 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 APBB2Q92870 758 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 RPF1Q9H9Y2 349 aaKnown RBP14.04□□□□□ -0.16
LSM8-201ENST00000249299 TMEM8AQ9HCN3 771 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 PLCB1Q9NQ66 1216 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 TOPORSQ9NS56 1045 aaPredicted RBP14.04□□□□□ -0.16
LSM8-201ENST00000249299 FBXL5Q9UKA1 691 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 DERAQ9Y315 318 aa14.04□□□□□ -0.16
LSM8-201ENST00000249299 GOLGA8IPA6NC78 632 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 GOLGA8JA6NMD2 632 aa14.03□□□□□ -0.16
LSM8-201ENST00000249299 PES1O00541 588 aaKnown RBP14.03□□□□□ -0.16
LSM8-201ENST00000249299 TEX33O43247 280 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms