RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 BRD9Q9H8M2 597 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 HCFC1R1Q9NWW0 138 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 SEPT9Q9UHD8 586 aaPredicted RBP13.41□□□□□ -0.26
RFPL3-201ENST00000249007 NOTCH4Q99466 2003 aa13.41□□□□□ -0.26
RFPL3-201ENST00000249007 IGKV6-21A0A0C4DH24 114 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 SMCO2A6NFE2 343 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 AXIN1O15169 862 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 CYP3A4P08684 503 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 ITGA4P13612 1032 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 SPINK2P20155 84 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 CLK2P49760 499 aaKnown RBP13.4□□□□□ -0.26
RFPL3-201ENST00000249007 SCNN1GP51170 649 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 NOVA1P51513 510 aaKnown RBP13.4□□□□□ -0.26
RFPL3-201ENST00000249007 UBXN11Q5T124 520 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 TMTC2Q8N394 836 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 SPEM1Q8N4L4 309 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 SLC7A14Q8TBB6 771 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 CRYGNQ8WXF5 182 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 ZCCHC14Q8WYQ9 949 aaKnown RBP13.4□□□□□ -0.26
RFPL3-201ENST00000249007 MCRS1Q96EZ8 462 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 ZFP42Q96MM3 310 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 GLT8D2Q9H1C3 349 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 IFT122Q9HBG6 1241 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 GDE1Q9NZC3 331 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
RFPL3-201ENST00000249007 MRPS23Q9Y3D9 190 aaKnown RBP13.4□□□□□ -0.26
RFPL3-201ENST00000249007 TDRD15B5MCY1 1934 aaKnown RBP13.39□□□□□ -0.27
RFPL3-201ENST00000249007 HOXA11P31270 313 aaPredicted RBP13.39□□□□□ -0.27
RFPL3-201ENST00000249007 GAS6Q14393 721 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 GRM2Q14416 872 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 PRR16Q569H4 304 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 JAKMIP3Q5VZ66 844 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 TANGO2Q6ICL3 276 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 PLEKHM2Q8IWE5 1019 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 CNNM3Q8NE01 707 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 ELSPBP1Q96BH3 223 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 SH2D3AQ9BRG2 576 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 OSBPL3Q9H4L5 887 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 DNMT3BQ9UBC3 853 aaKnown RBP13.39□□□□□ -0.27
RFPL3-201ENST00000249007 WASF3Q9UPY6 502 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 PIAS3Q9Y6X2 628 aa13.39□□□□□ -0.27
RFPL3-201ENST00000249007 CELSR3Q9NYQ7 3312 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 TMEM150BA6NC51 233 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 K7ESF4 209 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 CHMP2AO43633 222 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 PRC1O43663 620 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 PAPSS2O95340 614 aaPredicted RBP13.38□□□□□ -0.27
RFPL3-201ENST00000249007 POU2F2P09086 479 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 CHRNB1P11230 501 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 ZNF252P-AS1Q0IIN9 211 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 FANCBQ8NB91 859 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 SMG8Q8ND04 991 aaKnown RBP13.38□□□□□ -0.27
RFPL3-201ENST00000249007 GATA6Q92908 595 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 IRF7Q92985 503 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 LOXL4Q96JB6 756 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 CEP89Q96ST8 783 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 CLSTN3Q9BQT9 956 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 MTA3Q9BTC8 594 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 TRMT61BQ9BVS5 477 aaKnown RBP13.38□□□□□ -0.27
RFPL3-201ENST00000249007 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
RFPL3-201ENST00000249007 PDCL3Q9H2J4 239 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 IPPQ9Y573 584 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 SLC12A7Q9Y666 1083 aa13.38□□□□□ -0.27
RFPL3-201ENST00000249007 SF3B1O75533 1304 aaKnown RBP eCLIP13.38□□□□□ -0.27
RFPL3-201ENST00000249007 TAF4O00268 1085 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 SH2B2O14492 632 aaPredicted RBP13.37□□□□□ -0.27
RFPL3-201ENST00000249007 GIPC1O14908 333 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 PDIA4P13667 645 aaKnown RBP13.37□□□□□ -0.27
RFPL3-201ENST00000249007 CLCN1P35523 988 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 PTH1RQ03431 593 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 HDAC1Q13547 482 aaPredicted RBP13.37□□□□□ -0.27
RFPL3-201ENST00000249007 CACNA1EQ15878 2313 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 XKR3Q5GH77 459 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 AXDND1Q5T1B0 1012 aaPredicted RBP13.37□□□□□ -0.27
RFPL3-201ENST00000249007 RNF43Q68DV7 783 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 MICU3Q86XE3 530 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 RABGGTAQ92696 567 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 MIOSQ9NXC5 875 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 CNTNAP5Q8WYK1 1306 aa13.37□□□□□ -0.27
RFPL3-201ENST00000249007 hCG_1984214I3L0E3 225 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 MAFO75444 373 aaPredicted RBP13.36□□□□□ -0.27
RFPL3-201ENST00000249007 TADA2AO75478 443 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 EPN2O95208 641 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 SFNP31947 248 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 RBM25P49756 843 aaKnown RBP13.36□□□□□ -0.27
RFPL3-201ENST00000249007 JAK3P52333 1124 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 PSMD5Q16401 504 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 SLC5A9Q2M3M2 681 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 UVSSAQ2YD98 709 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 ZNF713Q8N859 430 aaPredicted RBP13.36□□□□□ -0.27
RFPL3-201ENST00000249007 PIK3R5Q8WYR1 880 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 TMEM87BQ96K49 555 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 TTPALQ9BTX7 342 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 MINDY3Q9H8M7 445 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 ZFP14Q9HCL3 533 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 BARHL2Q9NY43 387 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 HES2Q9Y543 173 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
RFPL3-201ENST00000249007 TICRRQ7Z2Z1 1910 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms