RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 B4GALT5O43286 388 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 TOM1L1O75674 476 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 NPTXRO95502 500 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 FGFR1P11362 822 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 LAG3P18627 525 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 GTF2BQ00403 316 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 KYAT1Q16773 422 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 LEXMQ3ZCV2 418 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 PAN2Q504Q3 1202 aaKnown RBP12.36□□□□□ -0.43
SF3B6-201ENST00000233468 TMEM31Q5JXX7 168 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 UBXN11Q5T124 520 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 TMEM192Q8IY95 271 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 CLP1Q92989 425 aaKnown RBP12.36□□□□□ -0.43
SF3B6-201ENST00000233468 DNAJC19Q96DA6 116 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 FAM193BQ96PV7 902 aaPredicted RBP12.36□□□□□ -0.43
SF3B6-201ENST00000233468 ACO2Q99798 780 aaKnown RBP12.36□□□□□ -0.43
SF3B6-201ENST00000233468 C11orf84Q9BUA3 381 aaPredicted RBP12.36□□□□□ -0.43
SF3B6-201ENST00000233468 TRIM9Q9C026 710 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 PDZD7Q9H5P4 517 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 RSAD1Q9HA92 442 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 TBX20Q9UMR3 447 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 IPPQ9Y573 584 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 KIAA1671Q9BY89 1806 aa12.36□□□□□ -0.43
SF3B6-201ENST00000233468 FRMD3A2A2Y4 597 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 HNRNPDLO14979 420 aaKnown RBP12.35□□□□□ -0.43
SF3B6-201ENST00000233468 CLDN3O15551 220 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 NR1I2O75469 434 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 NUDT7P0C024 238 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 MCF2P10911 925 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 CTNNB1P35222 781 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 PPM1AP35813 382 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 BMPR1AP36894 532 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 MATR3P43243 847 aaKnown RBP eCLIP12.35□□□□□ -0.43
SF3B6-201ENST00000233468 LIG4P49917 911 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 NDUFA8P51970 172 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 YARSP54577 528 aaKnown RBP12.35□□□□□ -0.43
SF3B6-201ENST00000233468 RNASELQ05823 741 aaKnown RBP12.35□□□□□ -0.43
SF3B6-201ENST00000233468 PTPROQ16827 1216 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 TCEAL5Q5H9L2 206 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 NOMO2Q5JPE7 1267 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 NT5DC1Q5TFE4 455 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 SLFN12LQ6IEE8 588 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 PTCRAQ6ISU1 281 aaPredicted RBP12.35□□□□□ -0.43
SF3B6-201ENST00000233468 MPZL3Q6UWV2 235 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 UNC13DQ70J99 1090 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 ZNF720Q7Z2F6 126 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 SFR1Q86XK3 245 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 HELQQ8TDG4 1101 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 MRPL38Q96DV4 380 aaKnown RBP12.35□□□□□ -0.43
SF3B6-201ENST00000233468 CHAMP1Q96JM3 812 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 CASD1Q96PB1 797 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 EIF2AQ9BY44 585 aaKnown RBP12.35□□□□□ -0.43
SF3B6-201ENST00000233468 TMEM206Q9H813 350 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 TOPORSQ9NS56 1045 aaPredicted RBP12.35□□□□□ -0.43
SF3B6-201ENST00000233468 STK39Q9UEW8 545 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 PARP2Q9UGN5 583 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 SERTAD1Q9UHV2 236 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 TTC3P53804 2025 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 MUC6Q6W4X9 2439 aa12.35□□□□□ -0.43
SF3B6-201ENST00000233468 GRXCR2A6NFK2 248 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 C5orf67F2Z3F1 127 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 H3BNC9 293 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 GPR37L1O60883 481 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 OFD1O75665 1012 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 ZNF202O95125 648 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 GCNT3O95395 438 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 LINC00271P0C7V0 271 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 ATF7P17544 494 aaPredicted RBP12.34□□□□□ -0.43
SF3B6-201ENST00000233468 AFMP43652 599 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 ALDH7A1P49419 539 aaKnown RBP12.34□□□□□ -0.43
SF3B6-201ENST00000233468 GPM6BQ13491 265 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 HSP90AA2PQ14568 343 aaPredicted RBP12.34□□□□□ -0.43
SF3B6-201ENST00000233468 POSTNQ15063 836 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 ZNF568Q3ZCX4 644 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 CLLU1OSQ5K130 101 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 EP400NLQ6ZTU2 488 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 MAP4K3Q8IVH8 894 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 SMG8Q8ND04 991 aaKnown RBP12.34□□□□□ -0.43
SF3B6-201ENST00000233468 STAMQ92783 540 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 LPPQ93052 612 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 P2RX5Q93086 422 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 PAGE5Q96GU1 130 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 ACCSQ96QU6 501 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 RPS6KC1Q96S38 1066 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 CCDC94Q9BW85 323 aaPredicted RBP12.34□□□□□ -0.43
SF3B6-201ENST00000233468 TARS2Q9BW92 718 aaKnown RBP12.34□□□□□ -0.43
SF3B6-201ENST00000233468 APOL6Q9BWW8 343 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 TYW1Q9NV66 732 aaKnown RBP12.34□□□□□ -0.43
SF3B6-201ENST00000233468 INPP5FQ9Y2H2 1132 aa12.34□□□□□ -0.43
SF3B6-201ENST00000233468 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.34□□□□□ -0.43
SF3B6-201ENST00000233468 MRPL42Q9Y6G3 142 aaKnown RBP12.34□□□□□ -0.43
SF3B6-201ENST00000233468 COL4A6Q14031 1691 aa12.33□□□□□ -0.44
SF3B6-201ENST00000233468 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
SF3B6-201ENST00000233468 CSPG5O95196 566 aa12.33□□□□□ -0.44
SF3B6-201ENST00000233468 KIF20AO95235 890 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms