RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SLC27A3Q5K4L6 730 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 TRIM11Q96F44 468 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 ATXN7L3BQ96GX2 97 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 SLIT1O75093 1534 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 CDH16O75309 829 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 CDK17Q00537 523 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 SPP2Q13103 211 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 ORC2Q13416 577 aaPredicted RBP14.61□□□□□ -0.07
NFKB1-201ENST00000226574 RBBP5Q15291 538 aaKnown RBP14.61□□□□□ -0.07
NFKB1-201ENST00000226574 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.61□□□□□ -0.07
NFKB1-201ENST00000226574 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 DNAAF3Q8N9W5 541 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 RNF169Q8NCN4 708 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.61□□□□□ -0.07
NFKB1-201ENST00000226574 CAVIN3Q969G5 261 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 FAM84AQ96KN4 292 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 HEXIM2Q96MH2 286 aaKnown RBP14.61□□□□□ -0.07
NFKB1-201ENST00000226574 DCTN3O75935 186 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 ANP32DO95626 131 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 YY1P25490 414 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 COILP38432 576 aaPredicted RBP14.61□□□□□ -0.07
NFKB1-201ENST00000226574 ARFIP2P53365 341 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 TPD52P55327 224 aaPredicted RBP14.61□□□□□ -0.07
NFKB1-201ENST00000226574 PDE1CQ14123 709 aaPredicted RBP14.61□□□□□ -0.07
NFKB1-201ENST00000226574 SH2D4BQ5SQS7 431 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 RHOT1Q8IXI2 618 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 DAGLBQ8NCG7 672 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 ACER1Q8TDN7 264 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 KRT35Q92764 455 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 ARHGEF26Q96DR7 871 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 STAMBPL1Q96FJ0 436 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 SHCBP1LQ9BZQ2 653 aa14.61□□□□□ -0.07
NFKB1-201ENST00000226574 F8VZ95 297 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 STK10O94804 968 aaKnown RBP14.6□□□□□ -0.07
NFKB1-201ENST00000226574 ZBED1O96006 694 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 SHBGP04278 402 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 FLT3P36888 993 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 SLC8A3P57103 927 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 RAPH1Q70E73 1250 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 SPATA24Q86W54 205 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 SLC13A5Q86YT5 568 aaPredicted RBP14.6□□□□□ -0.07
NFKB1-201ENST00000226574 KAT5Q92993 513 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 TMEM143Q96AN5 459 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 PPP1R36Q96LQ0 422 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 TAS2R14Q9NYV8 317 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 HAO1Q9UJM8 370 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 SLC4A7Q9Y6M7 1214 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 CAPN9O14815 690 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 PPFIA2O75334 1257 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 SOX10P56693 466 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 OSBPL8Q9BZF1 889 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 VCPKMTQ9H867 229 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 TOPORSQ9NS56 1045 aaPredicted RBP14.6□□□□□ -0.07
NFKB1-201ENST00000226574 NEU2Q9Y3R4 380 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 MAP3K7O43318 606 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 YWHABP31946 246 aaKnown RBP14.6□□□□□ -0.07
NFKB1-201ENST00000226574 ARL4CP56559 192 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 VTI1AQ96AJ9 217 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 AGBL1Q96MI9 1066 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 SEL1LQ9UBV2 794 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 SLC9A2Q9UBY0 812 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 POLLQ9UGP5 575 aa14.6□□□□□ -0.07
NFKB1-201ENST00000226574 ATXN3P54252 364 aaPredicted RBP14.59□□□□□ -0.07
NFKB1-201ENST00000226574 EPHA7Q15375 998 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 C1orf228Q6PIY5 440 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 MAP7D3Q8IWC1 876 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 SYN2Q92777 582 aaPredicted RBP14.59□□□□□ -0.07
NFKB1-201ENST00000226574 SLC5A5Q92911 643 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 CDC42EP4Q9H3Q1 356 aaKnown RBP14.59□□□□□ -0.07
NFKB1-201ENST00000226574 hCG_2014768A0A024R1R8 64 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 ECE2O60344 883 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 GRAP2O75791 330 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 ARP10275 920 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 C1orf146Q5VVC0 180 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 APTXQ7Z2E3 356 aaKnown RBP14.59□□□□□ -0.07
NFKB1-201ENST00000226574 TMC3Q7Z5M5 1100 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 SLC47A2Q86VL8 602 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 LRRC43Q8N309 656 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 TMEM35BQ8NCS4 154 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 ATP8B4Q8TF62 1192 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 BAP1Q92560 729 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 MMTAG2Q9BU76 263 aaKnown RBP14.59□□□□□ -0.07
NFKB1-201ENST00000226574 MYO5BQ9ULV0 1848 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 Q3C1V9 767 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 SLC35C1Q96A29 364 aa14.59□□□□□ -0.07
NFKB1-201ENST00000226574 RTFDC1Q9BY42 306 aaPredicted RBP14.59□□□□□ -0.07
NFKB1-201ENST00000226574 ESYT2A0FGR8 921 aa14.58□□□□□ -0.07
NFKB1-201ENST00000226574 CFAP73A6NFT4 308 aa14.58□□□□□ -0.07
NFKB1-201ENST00000226574 A6NJR5 290 aa14.58□□□□□ -0.07
NFKB1-201ENST00000226574 PRPSAP2O60256 369 aa14.58□□□□□ -0.07
NFKB1-201ENST00000226574 CHRNA5P30532 468 aa14.58□□□□□ -0.07
NFKB1-201ENST00000226574 LRRC55Q6ZSA7 311 aa14.58□□□□□ -0.07
NFKB1-201ENST00000226574 PRCCQ92733 491 aaPredicted RBP14.58□□□□□ -0.07
NFKB1-201ENST00000226574 AGPSO00116 658 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 LPXNO60711 386 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 MAGEA4P43358 317 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 PPP4CP60510 307 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 CCDC33Q8N5R6 958 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 CCHCR1Q8TD31 782 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 PPWD1Q96BP3 646 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms