RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 AFMP43652 599 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 ERVFC1P60507 584 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 ASIC1P78348 528 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 GTF2BQ00403 316 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 PLCB3Q01970 1234 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 TIGD5Q53EQ6 642 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 ZNF720Q7Z2F6 126 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 APBB1IPQ7Z5R6 666 aaPredicted RBP13.89□□□□□ -0.19
LSM5-201ENST00000223084 ADGRD2Q7Z7M1 963 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 RABGGTAQ92696 567 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 KCNN1Q92952 543 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 HPS3Q969F9 1004 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 RPS6KC1Q96S38 1066 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 TRIM9Q9C026 710 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 BLZF1Q9H2G9 400 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 NSUN3Q9H649 340 aaKnown RBP13.89□□□□□ -0.19
LSM5-201ENST00000223084 MRPL44Q9H9J2 332 aaKnown RBP13.89□□□□□ -0.19
LSM5-201ENST00000223084 TLR9Q9NR96 1032 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 FAN1Q9Y2M0 1017 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 PRG3Q9Y2Y8 225 aaPredicted RBP13.89□□□□□ -0.19
LSM5-201ENST00000223084 TISP43B9A030 160 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 ANKRD63C9JTQ0 380 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 F8W810 466 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 NRP1O14786 923 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 ACTN4O43707 911 aaKnown RBP13.88□□□□□ -0.19
LSM5-201ENST00000223084 ALDH2P05091 517 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 MYBP10242 640 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 GTF2F1P35269 517 aaKnown RBP eCLIP13.88□□□□□ -0.19
LSM5-201ENST00000223084 GRM5P41594 1212 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 OR1G1P47890 313 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 LIG4P49917 911 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 CASP5P51878 434 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 NDUFA8P51970 172 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 AMPD3Q01432 767 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 KRT17Q04695 432 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 UBE3AQ05086 875 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 DSC1Q08554 894 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 KCNA1Q09470 495 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 COASYQ13057 564 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 NOLC1Q14978 699 aaKnown RBP eCLIP13.88□□□□□ -0.19
LSM5-201ENST00000223084 GLRA4Q5JXX5 417 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 SLC39A4Q6P5W5 647 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 ZPBP2Q6X784 338 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 CCDC65Q8IXS2 484 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 FSIP1Q8NA03 581 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 MICAL1Q8TDZ2 1067 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 TMEM169Q96HH4 297 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 IGSF21Q96ID5 467 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 C7orf25Q9BPX7 421 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 TMEM175Q9BSA9 504 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
LSM5-201ENST00000223084 STRA6Q9BX79 667 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 LRRC27Q9C0I9 530 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 GOLPH3LQ9H4A5 285 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 ST6GALNAC4Q9H4F1 302 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 SEL1LQ9UBV2 794 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
LSM5-201ENST00000223084 HPSEQ9Y251 543 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 CITO14578 2027 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 UNC80Q8N2C7 3258 aa13.88□□□□□ -0.19
LSM5-201ENST00000223084 FSCN2O14926 492 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 HNRNPDLO14979 420 aaKnown RBP13.87□□□□□ -0.19
LSM5-201ENST00000223084 CLDN3O15551 220 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 MEFVO15553 781 aaPredicted RBP13.87□□□□□ -0.19
LSM5-201ENST00000223084 PPP1R37O75864 691 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 GCNT3O95395 438 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 PIGRP01833 764 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 SLFN14P0C7P3 912 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 MCL1Q07820 350 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 GRIK3Q13003 919 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 CUL4BQ13620 913 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 ZBTB41Q5SVQ8 909 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 PLPP4Q5VZY2 271 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 RBM23Q86U06 439 aaKnown RBP13.87□□□□□ -0.19
LSM5-201ENST00000223084 MAP4K3Q8IVH8 894 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.87□□□□□ -0.19
LSM5-201ENST00000223084 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 GLIS3Q8NEA6 775 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 PAGE5Q96GU1 130 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 ACAP3Q96P50 834 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 TCF25Q9BQ70 676 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 PAAF1Q9BRP4 392 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 VN1R3Q9BXE9 311 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 IGFLR1Q9H665 355 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 MAGEF1Q9HAY2 307 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 MARCH5Q9NX47 278 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 LZTS1Q9Y250 596 aa13.87□□□□□ -0.19
LSM5-201ENST00000223084 ZMYM2Q9UBW7 1377 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 A0A1W2PQ27 194 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 A0A1W2PQ64 194 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 A0A1W2PQD8 194 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 CASTOR2A6NHX0 329 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 PER2O15055 1255 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 PRPF6O94906 941 aaKnown RBP13.86□□□□□ -0.19
LSM5-201ENST00000223084 THP07101 528 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 SCP2P22307 547 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 TNFSF9P41273 254 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 SYKP43405 635 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 YARSP54577 528 aaKnown RBP13.86□□□□□ -0.19
LSM5-201ENST00000223084 TFF2Q03403 129 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms