RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CTNNBL1Q8WYA6 563 aaPredicted RBP18.77■□□□□ 0.6
VRK1-201ENST00000216639 MMS19Q96T76 1030 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 TINF2Q9BSI4 451 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 TLR10Q9BXR5 811 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 PARD6BQ9BYG5 372 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 KATNBL1Q9H079 304 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 ZCCHC17Q9NP64 241 aaKnown RBP18.77■□□□□ 0.6
VRK1-201ENST00000216639 RNF14Q9UBS8 474 aa18.77■□□□□ 0.6
VRK1-201ENST00000216639 MANSC4A6NHS7 340 aaPredicted RBP18.77■□□□□ 0.59
VRK1-201ENST00000216639 PAFAH1B1P43034 410 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 AP3M2P53677 418 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 GALCP54803 685 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 PRPF4BQ13523 1007 aaKnown RBP18.77■□□□□ 0.59
VRK1-201ENST00000216639 SYCE1Q8N0S2 351 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 MSANTD4Q8NCY6 345 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 AFG1LQ8WV93 481 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 TRAPPC12Q8WVT3 735 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 KREMEN1Q96MU8 473 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 CGRRF1Q99675 332 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 HAPLN2Q9GZV7 340 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 RNPEPQ9H4A4 650 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 PDE11AQ9HCR9 933 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 COL1A2P08123 1366 aa18.77■□□□□ 0.59
VRK1-201ENST00000216639 GRID2IPA4D2P6 1211 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 ZNF185O15231 689 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 C4BPAP04003 597 aaKnown RBP18.76■□□□□ 0.59
VRK1-201ENST00000216639 ZSCAN20P17040 1043 aaPredicted RBP18.76■□□□□ 0.59
VRK1-201ENST00000216639 PIK3CAP42336 1068 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 CLCN6P51797 869 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 BIRC3Q13489 604 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 SURF1Q15526 300 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 DUSP28Q4G0W2 176 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 GJC2Q5T442 439 aaPredicted RBP18.76■□□□□ 0.59
VRK1-201ENST00000216639 MEI1Q5TIA1 1274 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 IQSEC1Q6DN90 963 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 NFRKBQ6P4R8 1299 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 ZNF516Q92618 1163 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 KAT5Q92993 513 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 CALR3Q96L12 384 aaKnown RBP18.76■□□□□ 0.59
VRK1-201ENST00000216639 NLRP4Q96MN2 994 aa18.76■□□□□ 0.59
VRK1-201ENST00000216639 ACO2Q99798 780 aaKnown RBP18.76■□□□□ 0.59
VRK1-201ENST00000216639 ANKRD62A6NC57 917 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 C22orf31O95567 290 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 HARSP12081 509 aaKnown RBP18.75■□□□□ 0.59
VRK1-201ENST00000216639 INSRRP14616 1297 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 TMOD1P28289 359 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 PDE6CP51160 858 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 ZNF157P51786 506 aaPredicted RBP18.75■□□□□ 0.59
VRK1-201ENST00000216639 ITIH3Q06033 890 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 POU5F1BQ06416 359 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 GRM1Q13255 1194 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 ACVR2BQ13705 512 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 BRD3Q15059 726 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 CCDC70Q6NSX1 233 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 CHADLQ6NUI6 762 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 CREG2Q8IUH2 290 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 RPUSD2Q8IZ73 545 aaKnown RBP18.75■□□□□ 0.59
VRK1-201ENST00000216639 OLIG1Q8TAK6 271 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 TAF4BQ92750 862 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 NFKBIZQ9BYH8 718 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 EPC1Q9H2F5 836 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.75■□□□□ 0.595e-6■■■■■ 54.5
VRK1-201ENST00000216639 ZHX1Q9UKY1 873 aaPredicted RBP18.75■□□□□ 0.59
VRK1-201ENST00000216639 NCANO14594 1321 aa18.75■□□□□ 0.59
VRK1-201ENST00000216639 TMCO5BA8MYB1 307 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 INO80B-WBP1J3KQ70 363 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 ACKR2O00590 384 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 OGTO15294 1046 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 CYP26A1O43174 497 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 NCK2O43639 380 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 FTCDO95954 541 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 HLA-DRAP01903 254 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 EDN1P05305 212 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 CLCN3P51790 818 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 IGBP1P78318 339 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 TMEM132AQ24JP5 1023 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 ZNF572Q7Z3I7 529 aaPredicted RBP18.74■□□□□ 0.59
VRK1-201ENST00000216639 BRSK2Q8IWQ3 736 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 TPCN2Q8NHX9 752 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 EPS8L1Q8TE68 723 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 COG1Q8WTW3 980 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 SLC20A1Q8WUM9 679 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 RFFLQ8WZ73 363 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 INO80BQ9C086 356 aaPredicted RBP18.74■□□□□ 0.59
VRK1-201ENST00000216639 ANKZF1Q9H8Y5 726 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 ZNF236Q9UL36 1845 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 SGPL1O95470 568 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 ITGBL1O95965 494 aaPredicted RBP18.74■□□□□ 0.59
VRK1-201ENST00000216639 MCM3P25205 808 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 PHKA2P46019 1235 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 PTENP60484 403 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 MCL1Q07820 350 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 RPS6KA1Q15418 735 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 CFAP221Q4G0U5 840 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 TDRD10Q5VZ19 366 aaKnown RBP18.74■□□□□ 0.59
VRK1-201ENST00000216639 TSHZ1Q6ZSZ6 1077 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 ZBTB33Q86T24 672 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 OR6J1Q8NGC5 347 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 TATDN2Q93075 761 aa18.74■□□□□ 0.59
VRK1-201ENST00000216639 CCDC94Q9BW85 323 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms