RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ANKRD65E5RJM6 399 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 PLS3P13797 630 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 FGFR4P22455 802 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 ALDH5A1P51649 535 aaPredicted RBP14.65□□□□□ -0.06
SIX4-201ENST00000216513 KRT39Q6A163 491 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 SLC30A10Q6XR72 485 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 STOX1Q6ZVD7 989 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 ADGRA1Q86SQ6 560 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 SGMS1Q86VZ5 419 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 EPC1Q9H2F5 836 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 CERS4Q9HA82 394 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 FARP2O94887 1054 aaPredicted RBP14.65□□□□□ -0.06
SIX4-201ENST00000216513 MBL2P11226 248 aaPredicted RBP14.65□□□□□ -0.06
SIX4-201ENST00000216513 ZNF235Q14590 738 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 SYCP2LQ5T4T6 812 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 GMCL1P1Q8NEA9 526 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 NAGPAQ9UK23 515 aa14.65□□□□□ -0.06
SIX4-201ENST00000216513 SULT1E1P49888 294 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 GNGT1P63211 74 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 TRIM68Q6AZZ1 485 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 PBXIP1Q96AQ6 731 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 NDST4Q9H3R1 872 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 SARS2Q9NP81 518 aaKnown RBP14.64□□□□□ -0.07
SIX4-201ENST00000216513 WTIPA6NIX2 430 aaPredicted RBP14.64□□□□□ -0.07
SIX4-201ENST00000216513 NDUFV1P49821 464 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 IRX4P78413 519 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 PDE1BQ01064 536 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 ORC2Q13416 577 aaPredicted RBP14.64□□□□□ -0.07
SIX4-201ENST00000216513 CCDC170Q8IYT3 715 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 TRIM62Q9BVG3 475 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 CYP4F11Q9HBI6 524 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 PDE11AQ9HCR9 933 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 CAMTA1Q9Y6Y1 1673 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 AP3M2P53677 418 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 EPHB3P54753 998 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 IL31Q6EBC2 164 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 SDCCAG8Q86SQ7 713 aaPredicted RBP14.64□□□□□ -0.07
SIX4-201ENST00000216513 VSIG1Q86XK7 387 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 TTC39CQ8N584 583 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 CCDC51Q96ER9 411 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 RIT2Q99578 217 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 EMSYQ7Z589 1322 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 DNERQ8NFT8 737 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 RAB17Q9H0T7 212 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 HYOU1Q9Y4L1 999 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 HMGCRP04035 888 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 SHMT1P34896 483 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 RESTQ13127 1097 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 ZKSCAN8Q15776 578 aaPredicted RBP14.64□□□□□ -0.07
SIX4-201ENST00000216513 RBM23Q86U06 439 aaKnown RBP14.64□□□□□ -0.07
SIX4-201ENST00000216513 STMN2Q93045 179 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 HPS3Q969F9 1004 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 RMDN1Q96DB5 314 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 ERLEC1Q96DZ1 483 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 GOLPH3LQ9H4A5 285 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 SENP2Q9HC62 589 aa14.64□□□□□ -0.07
SIX4-201ENST00000216513 I3L4J1 428 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 CA4P22748 312 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 AVPR1AP37288 418 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 HARS2P49590 506 aaKnown RBP14.63□□□□□ -0.07
SIX4-201ENST00000216513 ZNF746Q6NUN9 644 aaPredicted RBP14.63□□□□□ -0.07
SIX4-201ENST00000216513 KDELC2Q7Z4H8 507 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 HSPBP1Q9NZL4 362 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 USP32Q8NFA0 1604 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 SLC15A5A6NIM6 579 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 FOXN1O15353 648 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 IGDCC4Q8TDY8 1250 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 EXT2Q93063 718 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 TARS2Q9BW92 718 aaKnown RBP14.63□□□□□ -0.07
SIX4-201ENST00000216513 INSRRP14616 1297 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 TRIM58Q8NG06 486 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 SCINQ9Y6U3 715 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 CABYRO75952 493 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 ARP10275 920 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 CASP2P42575 452 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 TIPINQ9BVW5 301 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 THAP9Q9H5L6 903 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 DHX35Q9H5Z1 703 aaKnown RBP14.63□□□□□ -0.07
SIX4-201ENST00000216513 IPPQ9Y573 584 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 FAM205CA6NFA0 338 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 TAF6P49848 677 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 FKBP1AP62942 108 aaKnown RBP14.63□□□□□ -0.07
SIX4-201ENST00000216513 METTL7BQ6UX53 244 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 RAB44Q7Z6P3 723 aaPredicted RBP14.63□□□□□ -0.07
SIX4-201ENST00000216513 SYTL5Q8TDW5 730 aaPredicted RBP14.63□□□□□ -0.07
SIX4-201ENST00000216513 IMPACTQ9P2X3 320 aa14.63□□□□□ -0.07
SIX4-201ENST00000216513 CSGALNACT1Q8TDX6 532 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 GMCL1Q96IK5 515 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 TACC3Q9Y6A5 838 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 A0A087WZ62 844 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 GNL1P36915 607 aaPredicted RBP14.62□□□□□ -0.07
SIX4-201ENST00000216513 NSUN2Q08J23 767 aaKnown RBP eCLIP14.62□□□□□ -0.07
SIX4-201ENST00000216513 IQSEC1Q6DN90 963 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 RNPC3Q96LT9 517 aaKnown RBP14.62□□□□□ -0.07
SIX4-201ENST00000216513 FDXACB1Q9BRP7 624 aaPredicted RBP14.62□□□□□ -0.07
SIX4-201ENST00000216513 AFF4Q9UHB7 1163 aaKnown RBP14.62□□□□□ -0.07
SIX4-201ENST00000216513 CCDC144BQ3MJ40 725 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 REEP2Q9BRK0 252 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 INTS2Q9H0H0 1204 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms