RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Cse1lQ9ERK4 971 aaKnown RBP9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Myoz2Q9JJW5 264 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm9774A0A0A6YVU8 407 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fbxl16A2RT62 479 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Abcb5B5X0E4 1255 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Chil3O35744 398 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 RasefQ5RI75 627 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Grm4Q68EF4 912 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Kbtbd3Q8BHI4 607 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Chmp1b1Q99LU0 199 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mrpl11Q9CQF0 192 aaKnown RBP9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Prpf4Q9DAW6 521 aaKnown RBP9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 NfkbiaQ9Z1E3 314 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Per2O54943 1257 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Col6a1Q04857 1025 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mylk3Q3UIZ8 795 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm14685Q52KH6 695 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ephb1Q8CBF3 984 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tceal3Q8R0A5 200 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Lrrc63A6H694 637 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Cyp2c68K7N6C2 491 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 InhbeO08717 350 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 P2ry10Q8BFU7 328 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fam53cQ8BXQ8 393 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Dnajc5gQ8C632 165 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tti1Q91V83 1085 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 PccaQ91ZA3 724 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mphosph6Q9D1Q1 161 aa9.75□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pik3c2bE9QAN8 1632 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mfsd4b4J3QNS5 503 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Xirp1O70373 1129 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fsd1lQ8BYN5 507 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 SucoQ8C341 1250 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Actl9Q8CG27 415 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mrgprx1Q8CIP3 322 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Vmn1r191Q8K4D0 298 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pdik1lQ8QZR7 341 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fmnl1Q9JL26 1094 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Cpsf3Q9QXK7 684 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Robo1O89026 1612 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm3893E9Q1I1 302 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 P01734 135 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Taf1bP97358 586 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Sh3gl2Q62420 352 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tasp1Q8R1G1 420 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Nol6Q8R5K4 1152 aaKnown RBP9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Dnajc14Q921R4 703 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Setd6Q9CWY3 473 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Nol3Q9D1X0 220 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tmod3Q9JHJ0 352 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Serpinb6cW4VSP4 379 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 GakQ99KY4 1305 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 TxlngQ8BHN1 524 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Arhgap29Q8CGF1 1266 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pnpt1Q8K1R3 783 aaKnown RBP9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Atxn7Q8R4I1 867 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Snx10Q9CWT3 201 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pabpc6Q9D4E6 643 aaKnown RBP9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Krt36B1AQ75 473 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm2237E9Q501 211 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm3591K7N6X2 186 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Alox15P39654 663 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 ItgadQ3V0T4 1168 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Odr4Q4PJX1 447 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Hsph1Q61699 858 aaKnown RBP9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gja3Q64448 417 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ms4a5Q810P8 197 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Sulf1Q8K007 870 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 NptxrQ99J85 493 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gm3248K7N721 186 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Papd7Q6PB75 542 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 SugctQ7TNE1 436 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Impg2Q80XH2 1243 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tlr3Q99MB1 905 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 RpainQ9CWY9 219 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Arfgef2A2A5R2 1792 aa9.74□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Kcnh4A2A5F7 1018 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Trappc11B2RXC1 1133 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Slc4a9E9PUP3 929 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ptk2P34152 1090 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Kcnj6P48542 425 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Prkag3Q8BGM7 489 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 TbckQ8BM85 762 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Nsmce3Q9CPR8 279 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Gadd45gQ9Z111 159 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 ProcP33587 460 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 LxnP70202 222 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fam193bQ3U2K0 892 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Wdr41Q3UDP0 460 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 AlcamQ61490 583 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ppp1r14bQ62084 147 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 PdxkQ8K183 312 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Xpo6Q924Z6 1125 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Trim42Q9D2H5 723 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Dmap1Q9JI44 468 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Akap4Q60662 849 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Samhd1Q60710 627 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ireb2Q811J3 963 aaKnown RBP9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Slc7a14Q8BXR1 771 aa9.73□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Kiaa0391Q8JZY4 584 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms