RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Tbc1d15Q9CXF4 671 aa11.61□□□□□ -0.55
Lig3-212ENSMUST00000173727 Q9D2Q3 444 aa11.61□□□□□ -0.55
Lig3-212ENSMUST00000173727 Msgn1Q9JK54 188 aa11.61□□□□□ -0.55
Lig3-212ENSMUST00000173727 PotegA5H0M4 473 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Skint7A7XV04 395 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Pla2g4aP47713 748 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 GscQ02591 256 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Nfe2Q07279 373 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 SpoplQ2M2N2 392 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Zfp957Q3UT76 567 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Mybpc2Q5XKE0 1136 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Cct6bQ61390 531 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Adam39Q7M762 756 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Eif4bQ8BGD9 611 aaKnown RBP11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 B4galt5Q9JMK0 388 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Nup210lQ9D2F7 1881 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Pds5aQ6A026 1332 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Irs1P35569 1233 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Srebf2Q3U1N2 1130 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Srrm1Q52KI8 946 aaKnown RBP11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Mbtd1Q6P5G3 631 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Q6PD19 689 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Rnf187Q8BFX1 236 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Spata16Q8C636 571 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Calhm6Q8C9E8 313 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 OgtQ8CGY8 1046 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Bclaf1Q8K019 919 aaKnown RBP11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Six6os1Q9CTN5 574 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Syf2Q9D198 242 aaKnown RBP11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Atp13a1Q9EPE9 1200 aaKnown RBP11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Tmod3Q9JHJ0 352 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Cdc42ep4Q9JM96 349 aaKnown RBP11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Mia3Q8BI84 1930 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Ank3G5E8K5 1961 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Dennd4aE9Q8V6 1869 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Gm11985A0A1B0GS61 206 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Cdr2lA2A6T1 465 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 DgkhD3YXJ0 1156 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Zfpm1O35615 995 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Gna15P30678 374 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 BC051142Q3V0M8 400 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Acbd5Q5XG73 508 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Pacsin1Q61644 441 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 NrcamQ810U4 1256 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Trmt13Q8BYH3 481 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Fam193aQ8CGI1 1231 aaKnown RBP11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Slc26a6Q8CIW6 758 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Rpp40Q8R1F9 363 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Oit3Q8R4V5 546 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Ergic2Q9CR89 377 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Cdc42ep5Q9Z0X0 150 aa11.6□□□□□ -0.55
Lig3-212ENSMUST00000173727 Ttc13A0A1L1SSC7 844 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Sclt1G5E861 688 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Gucy1b3O54865 620 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Psmc4P54775 418 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Polr2fP61219 127 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Capza3P70190 299 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 FdxrQ61578 494 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Psmd5Q8BJY1 504 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Vmn1r191Q8K4D0 298 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 SrcapA0A087WQ44 3271 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Prpmp5E9PXN1 296 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Klhl33G3UW92 533 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 PtprcP06800 1291 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Nhej1Q3KNJ2 295 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Foxn1Q61575 648 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Ddx3xQ62167 662 aaKnown RBP11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 FAM120AQ6A0A9 1112 aaKnown RBP11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 RimklbQ80WS1 387 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Def6Q8C2K1 630 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Syt5Q9R0N5 386 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Wdr72D3YYM4 1114 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Chrna1P04756 457 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Scp2P32020 547 aaKnown RBP11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Cdca2Q14B71 982 aaKnown RBP11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Fscn2Q32M02 492 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Ddx4Q61496 702 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Gigyf2Q6Y7W8 1291 aaKnown RBP11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Tubb2aQ7TMM9 445 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Ush1gQ80T11 461 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Fam49aQ8BHZ0 323 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Qsox1Q8BND5 748 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Pcdhac2Q91Y09 1006 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 EpgnQ924X1 152 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Tlr3Q99MB1 905 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Tubb2bQ9CWF2 445 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Lrrc57Q9D1G5 239 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Pidd1Q9ERV7 915 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Znf354bQ9QXT9 601 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Fut8Q9WTS2 575 aa11.59□□□□□ -0.55
Lig3-212ENSMUST00000173727 Olfr456B2RT27 312 aa11.58□□□□□ -0.56
Lig3-212ENSMUST00000173727 TroapB7ZNG4 668 aa11.58□□□□□ -0.56
Lig3-212ENSMUST00000173727 Vmn2r15L7N2A0 855 aa11.58□□□□□ -0.56
Lig3-212ENSMUST00000173727 Lrrc4bP0C192 709 aa11.58□□□□□ -0.56
Lig3-212ENSMUST00000173727 Tcp11Q01755 566 aa11.58□□□□□ -0.56
Lig3-212ENSMUST00000173727 Phactr1Q2M3X8 580 aa11.58□□□□□ -0.56
Lig3-212ENSMUST00000173727 Pnpla5Q32LZ8 432 aa11.58□□□□□ -0.56
Lig3-212ENSMUST00000173727 Ccdc114Q3UX62 658 aa11.58□□□□□ -0.56
Lig3-212ENSMUST00000173727 Adcy2Q80TL1 1090 aa11.58□□□□□ -0.56
Lig3-212ENSMUST00000173727 Rint1Q8BZ36 792 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms