RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Hsf2bpQ9D4G2 338 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Tjp1P39447 1745 aaKnown RBP10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Prr16A3KMN5 304 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Tspyl1O88852 379 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Myd88P22366 296 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Tfap2aP34056 437 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Q3TYL0 343 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Fam160a1Q505K2 1081 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Grid1Q61627 1009 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Snrnp35Q9D384 244 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Ccdc70Q9D9B0 223 aa10.84□□□□□ -0.67
Ctc1-202ENSMUST00000116359 Krt24A1L317 512 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 NppbP40753 121 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Vav2Q60992 868 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Tsg101Q61187 391 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Il17aQ62386 158 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Sh3rf1Q69ZI1 892 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Arhgef18Q6P9R4 1021 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Magea3Q6T340 320 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Wdr91Q7TMQ7 748 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Lrif1Q8CDD9 755 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Kiaa0319lQ8K135 1048 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Rpa3Q9CQ71 121 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Usp21Q9QZL6 566 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 AfdnQ9QZQ1 1820 aaKnown RBP10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Magea10A2AMW4 325 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 AlplP09242 524 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 AaasP58742 546 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Cnnm4Q69ZF7 771 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 GnptabQ69ZN6 1235 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Pus7lQ8CE46 702 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Mospd1Q8VEL0 213 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ttll1Q91V51 423 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ivns1abpQ920Q8 642 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Angptl2Q9R045 493 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Btbd19S4R1I0 287 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Zfp612A0A1D5RMC2 672 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 JrklB2RRL2 523 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 OatP29758 439 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Rbm46P86049 533 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Mcm9Q2KHI9 1134 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Sema4aQ62178 760 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Retreg2Q6NS82 541 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Fads6Q80UG1 342 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Igdcc3Q8BQC3 813 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Arfip2Q8K221 341 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Bbs7Q8K2G4 715 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 PhykplQ8R1K4 467 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Q91Z58 1206 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Wbp11Q923D5 641 aaKnown RBP10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Chst12Q99LL3 419 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Tmem81Q9D5K1 259 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Tmed2Q9R0Q3 201 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Sept6Q9R1T4 434 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Rps6ka4Q9Z2B9 773 aa10.83□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Gm11985A0A1B0GS61 206 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Gm7168A0AUV4 508 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 ItgaeQ60677 1167 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ppp2r5eQ61151 467 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Arhgap30Q640N3 1101 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Rtp1Q8C8C1 263 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Calml4Q91WQ9 153 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ltb4r2Q9JJL9 360 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Clcn2Q9R0A1 908 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Klrc2Q9WTJ9 238 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Pex11aQ9Z211 246 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Zfp362B1ASA5 418 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Magea6O89010 325 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 PpargP37238 505 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Fitm2P59266 262 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ythdf1P59326 559 aaKnown RBP10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Tatdn3Q3U1C6 294 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Rapgef1Q3UHC1 1224 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Cog7Q3UM29 770 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Rhbdf1Q6PIX5 856 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 PdhxQ8BKZ9 501 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Dctn2Q99KJ8 402 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 AacsQ9D2R0 672 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Olr1Q9EQ09 363 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Phf11A6H5X4 337 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Srsf11E9Q6E5 511 aaKnown RBP10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Xbp1O35426 267 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Slc27a3O88561 667 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Tagap1P0CAX8 505 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Prl3d1P18121 224 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Senp1P59110 640 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Cd300lgQ1ERP8 331 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ankmy2Q3TPE9 440 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Fgfr1opQ66JX5 399 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ppp2r5bQ6PD28 497 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Gm5622Q810Q0 167 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ppp1r12bQ8BG95 976 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Slc39a13Q8BZH0 361 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ttc16Q8C1F5 767 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ppp1r3gQ9CW07 347 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Capn12Q9ER56 720 aa10.82□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Myh3P13541 1940 aa10.81□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Dennd3A2RT67 1274 aa10.81□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Gpr182P43142 395 aa10.81□□□□□ -0.68
Ctc1-202ENSMUST00000116359 Ripk2P58801 539 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms