RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Akt3Q9WUA6 479 aa27.69■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Gm2030D3Z7C4 212 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Rps6ka1P18653 724 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Kcnt1Q6ZPR4 1224 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Scrn2Q8VCA8 425 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Pdk2Q9JK42 407 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Tjp2Q9Z0U1 1167 aaKnown RBP27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Plekhg4A0A1L1SU27 1217 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 PotegA5H0M4 473 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Nfx1B1AY10 1114 aaKnown RBP27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Mroh9G5E8L9 891 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Cpsf2O35218 782 aaKnown RBP27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Tubb5P99024 444 aaKnown RBP27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Ush1gQ80T11 461 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Rassf4Q8CB96 322 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Rnf181Q9CY62 165 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Igdcc4Q9EQS9 1252 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 B4galt5Q9JMK0 388 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Hs6st3Q9QYK4 470 aa27.68■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Zscan4-ps3A0A1B0GRH6 506 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Zscan4-ps2A0A1C7CYU6 506 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Atp2c2A7L9Z8 944 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Gm3127E9Q9P5 263 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Gm3453K7N724 263 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Kng1O08677 661 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Hoxc6P10629 235 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Lmnb2P21619 596 aaKnown RBP27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Xrcc5P27641 732 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 MmeQ61391 750 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Dsg1aQ61495 1057 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Grik4Q8BMF5 956 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 MafaQ8CF90 359 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Six6os1Q9CTN5 574 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Rab11fip1Q9D620 645 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Llcfc1Q9D9P8 108 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Atp13a1Q9EPE9 1200 aaKnown RBP27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Fmnl1Q9JL26 1094 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Eif2ak3Q9Z2B5 1114 aa27.67■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Gjc1P28229 396 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Nap1l1P28656 391 aaKnown RBP27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Rbp3P49194 1234 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Ccdc157Q5SPX1 718 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Snx19Q6P4T1 997 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Frmd5Q6P5H6 517 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Cwf19l2Q8BG79 887 aaKnown RBP27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Znf467Q8JZL0 594 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Tbc1d15Q9CXF4 671 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Dennd4aE9Q8V6 1869 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Zmynd8A2A484 1235 aaKnown RBP27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Prdm12A2AJ77 365 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Gm4297D3YWB7 211 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Chrna1P04756 457 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Mark2Q05512 776 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Arrdc3Q7TPQ9 414 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Usp20Q8C6M1 916 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Gnl3Q8CI11 538 aaKnown RBP27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Gtpbp10Q8K013 366 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Mmgt1Q8K273 131 aaKnown RBP27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Pcdha9Q91Y11 979 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Mettl7bQ9DD20 244 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Zkscan5Q9Z1D8 819 aa27.66■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Ank3G5E8K5 1961 aa27.65■■■□□ 2.02
Tpm1-216ENSMUST00000113707 AdkP55264 361 aa27.65■■■□□ 2.02
Tpm1-216ENSMUST00000113707 SpdyaQ5IBH7 310 aa27.65■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Klra5Q60652 266 aa27.65■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Usp6nlQ80XC3 819 aa27.65■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Olfr1499Q8VG65 314 aa27.65■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Golph3Q9CRA5 298 aa27.65■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Angptl3Q9R182 455 aa27.65■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Samd1D3YXK1 519 aa27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Klhl33G3UW92 533 aa27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Sptlc1O35704 473 aa27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Kcna3P16390 528 aa27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Phka1P18826 1241 aa27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Nfe2Q07279 373 aa27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Samhd1Q60710 627 aa27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 SugctQ7TNE1 436 aa27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 R3hdm2Q80TM6 1044 aaKnown RBP27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Eif4bQ8BGD9 611 aaKnown RBP27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Ces1fQ91WU0 561 aa27.64■■■□□ 2.02
Tpm1-216ENSMUST00000113707 Mgat1P27808 447 aa27.64■■■□□ 2.01
Tpm1-216ENSMUST00000113707 PltpP55065 493 aa27.64■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Mgat3Q10470 538 aa27.64■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Fam198aQ3UY90 562 aa27.64■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Hpcal4Q8BGZ1 191 aa27.64■■■□□ 2.01
Tpm1-216ENSMUST00000113707 GneQ91WG8 722 aaKnown RBP27.64■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Fubp1Q91WJ8 651 aaKnown RBP27.64■■■□□ 2.01
Tpm1-216ENSMUST00000113707 CalcbQ99MP3 130 aa27.64■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Kdm8Q9CXT6 414 aa27.64■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Cdr2lA2A6T1 465 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 4933406M09RikG3XA12 479 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 ZfxP17012 799 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Nub1P54729 614 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Scarf2P59222 833 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Vamp7P70280 220 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 ItgadQ3V0T4 1168 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Trim37Q6PCX9 961 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Cfap100Q80VN0 613 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Ctage5Q8R311 779 aa27.63■■■□□ 2.01
Tpm1-216ENSMUST00000113707 Usp15Q8R5H1 981 aa27.63■■■□□ 2.01
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms