RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Scp2P32020 547 aaKnown RBP12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Apol7eQ3UZ24 369 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Zfp341Q6PGC9 846 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 PhkbQ7TSH2 1085 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tmem117Q8BH18 514 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ccdc40Q8BI79 1192 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rab44Q8CB87 725 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Dppa3Q8QZY3 150 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Klhl36Q8R124 613 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 NcaldQ91X97 193 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gpatch1Q9DBM1 930 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Uts2Q9QZQ3 123 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Togaram1Q6A070 1776 aaKnown RBP12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Pde8aO88502 823 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 CalrP14211 416 aaKnown RBP12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Mnat1P51949 309 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 D630036H23RikQ3UQD6 204 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cnot7Q60809 285 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Camkk2Q8C078 588 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cfap36Q8C6E0 343 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Apol9bQ8C7I4 310 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rassf9Q8K342 435 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Apol9aQ8VDU3 310 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Nxf1Q99JX7 618 aaKnown RBP12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cd2bp2Q9CWK3 342 aaKnown RBP12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Prl2b1Q9DAZ2 228 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tcirg1Q9JHF5 834 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Drg2Q9QXB9 364 aaKnown RBP12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Zfp831A2ADM8 1628 aa12.36□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gpr161B2RPY5 545 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rap1gds1E9Q912 607 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rgsl1H3BL40 1073 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Aff1O88573 1216 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rcn1Q05186 325 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Vwa3aQ3UVV9 1148 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 A1cfQ5YD48 595 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Birc2Q62210 612 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Dync1li2Q6PDL0 492 aaKnown RBP12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Pgrmc2Q80UU9 217 aaKnown RBP12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Bag2Q91YN9 210 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rbm31yQ9D3U4 565 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Riok3Q9DBU3 519 aaKnown RBP12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Smok2bQ9QYZ3 484 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Smok2aQ9QYZ6 504 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tmed2Q9R0Q3 201 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gm4907B1AXB9 411 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tp53P02340 387 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 RxrbP28704 520 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 GclcP97494 637 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Lmntd2Q0VET5 664 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Odr4Q4PJX1 447 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ccdc125Q5U465 500 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gbp4Q61107 620 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Styk1Q6J9G1 429 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ntrk3Q6VNS1 825 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Mill1Q8HWE7 395 aa12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Chchd3Q9CRB9 227 aaKnown RBP12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Orc3Q9JK30 715 aaKnown RBP12.35□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Bpifb9bA2AJD1 591 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gm21962L7N280 338 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Atf2P16951 487 aaKnown RBP12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Slc10a4Q3UEZ8 437 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Sema5aQ62217 1077 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Prr18Q6PAN7 307 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Bpifb9aQ80XI7 591 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gprasp2Q8BUY8 826 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Sh3rf3Q8C120 878 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Btbd9Q8C726 612 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Mboat7Q8CHK3 473 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cdk9Q99J95 372 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Serpina9Q9D7D2 418 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 PycardQ9EPB4 193 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Extl2Q9ES89 330 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ctnnal1O88327 731 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 P4ha1Q60715 534 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Psen2Q61144 448 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Six1Q62231 284 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Stxbp2Q64324 593 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Pdzph1Q8BGR1 1238 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Wasf2Q8BH43 497 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Olfr1502Q8VG66 316 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 6030498E09RikB1AX85 169 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 DgkhD3YXJ0 1156 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Zfp839E9PUU5 921 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Slc3a2P10852 526 aaKnown RBP12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Cops2P61202 443 aaKnown RBP12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Klrb1Q0ZUP1 214 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rufy4Q3TYX8 563 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Frmd8Q3UFK8 466 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tigd5Q499M4 642 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 SpdyaQ5IBH7 310 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ppp2r5cQ60996 524 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 HarsQ61035 509 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Lamc2Q61092 1191 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Phc1Q64028 1012 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Tmc8Q7TN58 722 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 LnpkQ7TQ95 425 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ttc8Q8VD72 515 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Anapc4Q91W96 807 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Rnf135Q9CWS1 417 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms