RNA–Protein interactions for RNA: ENSMUST00000068452.9

Cnot1-201, Transcript of CCR4-NOT transcription complex subunit 1, mousemouse

TSL 1 (best) BASIC

Gene Cnot1, Length 8,152 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot1-201ENSMUST00000068452 Rpa3Q9CQ71 121 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Gm3138K7N754 218 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 H2-EaP01904 255 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 P04224 255 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Xrcc5P27641 732 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 GaaP70699 953 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Ect2Q07139 913 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Eepd1Q3TGW2 569 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Mief2Q5NCS9 454 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Trpc1Q61056 793 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Tnfaip2Q61333 691 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Creb3Q61817 404 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Acnat2Q8BGG9 420 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Pomgnt2Q8BW41 605 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Anapc2Q8BZQ7 837 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Rnf31Q924T7 1066 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Plod3Q9R0E1 741 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Wdr19Q3UGF1 1341 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 A630010A05RikA9C473 232 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Gm15448F6PZL4 682 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Kif1cO35071 1100 aaKnown RBP5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Calb1P12658 261 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Cd40lgP27548 260 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Erp29P57759 262 aaKnown RBP5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Taf1bP97358 586 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Syce1lQ5D525 247 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Rgl2Q61193 778 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Gpbp1Q6NXH3 473 aaKnown RBP5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Stk38lQ7TSE6 464 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Usp44Q8C2S0 711 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Rnf14Q9JI90 485 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Cul1Q9WTX6 776 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Ugt1a5B2RT14 529 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Vmn2r78K7N6U5 853 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Cct8P42932 548 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Wdr93Q402B2 695 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Cdc37Q61081 379 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Naif1Q6PFD7 327 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Otop3Q80UF9 577 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Frmd4aQ8BIE6 1020 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Ccdc80Q8R2G6 949 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Cbwd1Q8VEH6 393 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Rpn1Q91YQ5 608 aaKnown RBP5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Chchd3Q9CRB9 227 aaKnown RBP5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Rab27aQ9ERI2 221 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Dmap1Q9JI44 468 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Nova2D3YVV7 556 aaKnown RBP5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Casp14O89094 257 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Hoxc8P09025 242 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Nedd1P33215 660 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 NficP70255 439 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Phlda1Q62392 405 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Znf532Q6NXK2 1036 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Zbed4Q80WQ9 1168 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Rbm42Q91V81 474 aaKnown RBP5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Nek8Q91ZR4 698 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Antxr1Q9CZ52 562 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Tomm70Q9CZW5 611 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 2310002L09RikQ9D7L5 217 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Mettl7bQ9DD20 244 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Nek6Q9ES70 313 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Ddx60E9PZQ1 1711 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Lama4P97927 1816 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Slc27a6E9Q9W4 619 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Tmem132bF7BAB2 1078 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Nrg3O35181 713 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Akr1b7P21300 316 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Vcam1P29533 739 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Il1rapl1P59823 695 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Psmc5P62196 406 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Trim75Q3UWZ0 467 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Arl13bQ640N2 427 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Irak4Q8R4K2 459 aa5.1□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Exoc3l2D3YUP5 789 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Tada2bD3Z4Z0 420 aaKnown RBP5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Actn3O88990 900 aaKnown RBP5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 PtpreP49446 699 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Tmem165P52875 323 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Hddc2Q3SXD3 199 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Klrg2Q3UM83 387 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Tmprss11eQ5S248 423 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Ccdc92bQ5SUE3 299 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Sh3gl2Q62420 352 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Fhod1Q6P9Q4 1197 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Herc4Q6PAV2 1057 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Wdr47Q8CGF6 920 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Snrnp27Q8K194 155 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Rem2Q8VEL9 341 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Dnajc17Q91WT4 303 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Ces1fQ91WU0 561 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Sf3a3Q9D554 501 aaKnown RBP5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Timm50Q9D880 353 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Q9D937 123 aaKnown RBP5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Ern1Q9EQY0 977 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Cdkl2Q9QUK0 568 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Krt16Q9Z2K1 469 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Kat6bQ8BRB7 1872 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 JrklB2RRL2 523 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Krt78E9Q0F0 1068 aa5.09□□□□□ -1.59
Cnot1-201ENSMUST00000068452 Dnajb6O54946 365 aa5.09□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms