RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Klhdc7aA2APT9 773 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 AoahO35298 574 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 FosP01101 380 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Thumpd3P97770 505 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Bpifb5Q3UQ05 490 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gm5168Q4KL04 211 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Usp8Q80U87 1080 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pm20d1Q8C165 503 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Nme5Q99MH5 211 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ccdc130Q9D516 385 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tmem68Q9D850 329 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Scyl1Q9EQC5 806 aaKnown RBP12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rtl9Q32KG4 1339 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 B020011L13RikA0A087WQI7 412 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gm13084A2A8N0 494 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 4930544D05RikJ3QK56 214 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cdk14O35495 469 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Kcna3P16390 528 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Myl2P51667 166 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Kcnn2P58390 839 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Tbc1d10aP58802 500 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Neurog2P70447 263 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Fam193bQ3U2K0 892 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Map3k7Q62073 579 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Drd5Q8BLD9 478 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 SowahdQ8BY98 327 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Bhmt2Q91WS4 363 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Q91Z58 1206 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Zbtb12Q9Z150 459 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ssc5dQ8BV57 1371 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Gm28043E0CXC2 719 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rab21P35282 222 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sar1aP36536 198 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Fbln1Q08879 705 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Atp4aQ64436 1033 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 NrcamQ810U4 1256 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Cep57Q8CEE0 500 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Unc5bQ8K1S3 945 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Grk1Q9WVL4 564 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 JrklB2RRL2 523 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Prr7Q3V0I2 269 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Dclre1bQ8C7W7 541 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Arfip2Q8K221 341 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Atxn7Q8R4I1 867 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sh2b2Q9JID9 621 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sh2d3cQ9QZS8 854 aa12.03□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Osbpl7A2A716 963 aa12.02□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Sh2d4bA6X942 431 aa12.02□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Ccdc175E9PVB3 822 aa12.02□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Rab20P35295 233 aa12.02□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Fmr1P35922 614 aaKnown RBP12.02□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Zcchc2Q69ZB8 1166 aa12.02□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Fgd4Q91ZT5 766 aa12.02□□□□□ -0.48
Topbp1-201ENSMUST00000035164 1700013H16RikQ9DAC5 291 aa12.02□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Pck1Q9Z2V4 622 aa12.02□□□□□ -0.48
Topbp1-201ENSMUST00000035164 Lrrc38A2VDH3 298 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 NostrinQ6WKZ7 506 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Lyve1Q8BHC0 318 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slx1bQ8BX32 270 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Med10Q9CXU0 135 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Fam187aQ9D3R5 417 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 H2-OaQ9QWV1 250 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mark3Q03141 753 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 InhbaQ04998 424 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Agxt2Q3UEG6 513 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Garnl3Q3V0G7 1038 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 DaglaQ6WQJ1 1044 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Znf879Q8BI99 563 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tph2Q8CGV2 488 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cuedc2Q9CXX9 284 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Htra2Q9JIY5 458 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slc8a3S4R2P9 928 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mt-CybP00158 381 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gsdmc4Q3TR54 480 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Upf3bQ3ULL6 472 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tfcp2l1Q3UNW5 479 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PapolaQ61183 739 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 GnptabQ69ZN6 1235 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 OcrlQ6NVF0 900 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 3830417A13RikQ8BQJ2 303 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Klhl11Q8CE33 709 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rrp15Q9CYX7 281 aaKnown RBP12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Q9DAQ4 598 aa12.02□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pdzrn4E9PUZ9 1014 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Calb2Q08331 271 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pick1Q62083 416 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 TdrkhQ80VL1 560 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 GlmnQ8BZM1 596 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 CenpuQ8C4M7 410 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gm5114W4VSN8 858 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Col4a1P02463 1669 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Foxm1O08696 760 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Unc5cO08747 931 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rag1P15919 1040 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Alox15P39654 663 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Sesn2P58043 480 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ppp2r5cQ60996 524 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ankfy1Q810B6 1169 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Kbtbd3Q8BHI4 607 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gnl3Q8CI11 538 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms