RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Dnajb7Q9QYI8 312 aa10.52□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ambra1A2AH22 1300 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 CluhQ5SW19 1315 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Lrriq4A6H6A4 596 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gm5795E9PZN8 263 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 DgkkE9Q7N4 1118 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Art2bO35975 289 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 TxnP10639 105 aaKnown RBP10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Man1a2P39098 641 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 NogP97466 232 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Kcnma1Q08460 1209 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Oca2Q62052 833 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gga2Q6P5E6 603 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 NemfQ8CCP0 1064 aaKnown RBP10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Anapc4Q91W96 807 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Tpd52l2Q9CYZ2 220 aaKnown RBP10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Mms19Q9D071 1031 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 IscuQ9D7P6 168 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rtn3Q9ES97 964 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 PtprvP70289 1705 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Usp31E9Q6Y8 1344 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gm20721E9Q2U8 318 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 C1qbpO35658 278 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Igfbp4P47879 254 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Mif4gdQ3UBZ5 222 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ppp1r12bQ8BG95 976 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 GancQ8BVW0 898 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Angel2Q8K1C0 544 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 OtoaQ8K561 1137 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ero1bQ8R2E9 467 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Pomgnt1Q91X88 660 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Fgd4Q91ZT5 766 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 SmtnQ921U8 923 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Riok3Q9DBU3 519 aaKnown RBP10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Arhgef7Q9ES28 862 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Tmod3Q9JHJ0 352 aa10.52□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Dcdc2bF7BCK0 340 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gm3415J3QMS8 315 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rfpl4bJ3QPR6 266 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Klc1O88447 541 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Pstpip1P97814 415 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Runx2Q08775 607 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ttc39dQ0VF76 604 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Nsun7Q14AW5 724 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Trmt10cQ3UFY8 414 aaKnown RBP10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Dab2ipQ3UHC7 1189 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Plekha7Q3UIL6 1118 aaKnown RBP10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 FntaQ61239 377 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Bbs7Q8K2G4 715 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Slf1Q8R3P9 1054 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gm3404Q9D506 307 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Adam22Q9R1V6 904 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gm43738A0A0G2JEA5 862 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Atp2c2A7L9Z8 944 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Etnk2A7MCT6 385 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Krt1P04104 637 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ifnl2Q4VK74 193 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Zbtb8osQ505B7 168 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Bank1Q80VH0 783 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rnf168Q80XJ2 565 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Q8BGD0 127 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Sp8Q8BMJ8 486 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Alg3Q8K2A8 438 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ripor3A1L3T7 938 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Lrrc6O88978 473 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Pola2P33611 600 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Dynlt1P51807 113 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Thumpd3P97770 505 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ptgs2Q05769 604 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rgs9bpQ148R9 237 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Fam193bQ3U2K0 892 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Arhgap44Q5SSM3 814 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rab3ipQ68EF0 428 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Olfr832Q7TRG9 312 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 RimklbQ80WS1 387 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Fam83aQ8K2P2 436 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Tasp1Q8R1G1 420 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Lrrc14Q8VC16 493 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Glis2Q8VDL9 521 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Chchd3Q9CRB9 227 aaKnown RBP10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Iqcf1Q9D9K8 182 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 1700016D06RikQ9DAA5 166 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 C1qtnf1Q9QXP7 281 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Anapc7Q9WVM3 565 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Vnn1Q9Z0K8 512 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Scgb2b18A0A087WPA9 112 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Serpina3iD3Z450 408 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ccdc153P0C7Q1 202 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Pdha1P35486 390 aaKnown RBP10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Atoh1P48985 351 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Vwa3aQ3UVV9 1148 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Pfdn4Q3UWL8 134 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Trim38Q5SZ99 471 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Sec23ipQ6NZC7 998 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Clca4aQ6Q473 924 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 N4bp3Q8C7U1 537 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Usp27Q8CEG8 438 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Krt5Q922U2 580 aa10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Vwa5aQ99KC8 793 aaKnown RBP10.51□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Polr3eQ9CZT4 710 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms