RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Zfp566Q8VCI1 386 aa14.67□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Cyp3a25O09158 503 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Mif4gdQ3UBZ5 222 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Rasa3Q60790 834 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 TwnkQ8CIW5 685 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Slc12a8Q8VI23 705 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Pcdhga4Q91XY4 930 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Usp29Q9ES63 869 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Erbb3Q61526 1339 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 EgfrQ01279 1210 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 HelqQ2VPA6 1069 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Krt31Q61765 416 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Elac2Q80Y81 831 aaKnown RBP14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Klhl11Q8CE33 709 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Lmbrd1Q8K0B2 537 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Ccdc137Q8R0K4 290 aaKnown RBP14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Tex44Q9DA60 530 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Map3k20Q9ESL4 802 aaKnown RBP14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Pole2O54956 527 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Eepd1Q3TGW2 569 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Zmynd10Q99ML0 440 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Irx5Q9JKQ4 484 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 SprtnG3X912 497 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Grk4O70291 574 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Egfl8Q6GUQ1 293 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 LRWD1Q8BUI3 648 aaKnown RBP14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Mad2l2Q9D752 211 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 PycardQ9EPB4 193 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Ppp1r3fQ9JIG4 799 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Gm6882J3KMT3 313 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Sat1P48026 171 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 RenbpP82343 430 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Gm10662Q3UT86 313 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Fam169aQ5XG69 665 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Rgl1Q60695 768 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Ddr2Q62371 854 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Scn3bQ8BHK2 215 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Taf2Q8C176 1104 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Trpv3Q8K424 791 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Thumpd2Q9CZB3 528 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Kbtbd12Q9D618 625 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Atp8b5A3FIN4 1183 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Ttc38A3KMP2 465 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Srp72F8VQC1 671 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Ppm1aP49443 382 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Cep295nlQ497N6 533 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Gstt1Q64471 240 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Gm3127E9Q9P5 263 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Gm8298J3QPI0 401 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Gm3453K7N724 263 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Tspan9Q8BJU2 239 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Smap1Q91VZ6 440 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Kiaa2013Q91X21 634 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Cnpy3Q9DAU1 276 aa14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Top3bQ9Z321 862 aaKnown RBP14.66□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Tgfb1i1Q62219 461 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Tcp10aQ80W76 438 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Slc44a2Q8BY89 706 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 NcaldQ91X97 193 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Chmp1b1Q99LU0 199 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 CsadQ9DBE0 493 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Slc40a1Q9JHI9 570 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Golga4Q91VW5 2238 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Abca16E9PWJ7 1678 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Snx12O70493 165 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Abcb1bP06795 1276 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 PdgfraP26618 1089 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Irf5P56477 497 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Ogfod1Q3U0K8 545 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Ddx17Q501J6 650 aaKnown RBP14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Supt20hQ7TT00 530 aaKnown RBP14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Mei1Q9D4I2 1268 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Nfe2l3Q9WTM4 660 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Gm8237E9Q257 205 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Nr1i3O35627 358 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Tph1P17532 447 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Mcl1P97287 331 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Krt2Q3TTY5 707 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Foxp4Q9DBY0 795 aaKnown RBP14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Hdac6Q9Z2V5 1149 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 CoblQ5NBX1 1337 aaKnown RBP14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Myh6Q02566 1938 aaKnown RBP14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Qtrt2B8ZXI1 415 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Serpinb6dQ3UWK8 375 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Syce1lQ5D525 247 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Deup1Q7M6Y5 601 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Tma7Q8K003 64 aaKnown RBP14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Dgcr8Q9EQM6 773 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Adam22Q9R1V6 904 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 6030498E09RikB1AX85 169 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Ccna2P51943 422 aaKnown RBP14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Slc7a1Q09143 622 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Znf473Q8BI67 892 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Hat1Q8BY71 416 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Txnrd1Q9JMH6 613 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Eddm13E9Q7F5 164 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 CflarO35732 481 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 MlxipQ2VPU4 917 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Glra4Q61603 456 aa14.65□□□□□ -0.06
Col5a1-201ENSMUST00000028280 Pcdhb15Q91Y04 786 aa14.65□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms