RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 HSP104P31539 908 aaKnown RBP-3.04□□□□□ -2.9
snR40snR40 VPH1P32563 840 aaKnown RBP-3.04□□□□□ -2.9
snR40snR40 NTC20P38302 140 aaPredicted RBP-3.04□□□□□ -2.9
snR40snR40 YEL008WP40001 126 aa-3.04□□□□□ -2.9
snR40snR40 YPT32P51996 222 aaKnown RBP-3.04□□□□□ -2.9
snR40snR40 MEH1Q02205 184 aa-3.04□□□□□ -2.9
snR40snR40 VTA1Q06263 330 aa-3.04□□□□□ -2.9
snR40snR40 DTD1Q07648 150 aaKnown RBP-3.04□□□□□ -2.9
snR40snR40 RPN5Q12250 445 aaKnown RBP-3.04□□□□□ -2.9
snR40snR40 ODC2Q99297 307 aa-3.04□□□□□ -2.9
snR40snR40 SRV2P17555 526 aaKnown RBP-3.05□□□□□ -2.9
snR40snR40 UBC8P28263 218 aa-3.05□□□□□ -2.9
snR40snR40 RNP1P32385 249 aa-3.05□□□□□ -2.9
snR40snR40 YHR180WP38868 163 aa-3.05□□□□□ -2.9
snR40snR40 PRP39P39682 629 aaKnown RBP-3.05□□□□□ -2.9
snR40snR40 HYR1P40581 163 aaKnown RBP-3.05□□□□□ -2.9
snR40snR40 SSH4P32343 579 aa-3.06□□□□□ -2.9
snR40snR40 OLA1P38219 394 aaKnown RBP-3.06□□□□□ -2.9
snR40snR40 TIR3P40552 269 aa-3.06□□□□□ -2.9
snR40snR40 GDS1P41913 522 aa-3.06□□□□□ -2.9
snR40snR40 YFH7P43591 353 aa-3.06□□□□□ -2.9
snR40snR40 DCV1P43595 202 aa-3.06□□□□□ -2.9
snR40snR40 BOL2P53082 120 aa-3.06□□□□□ -2.9
snR40snR40 MNP1P53163 194 aaPredicted RBP-3.06□□□□□ -2.9
snR40snR40 YGR026WP53217 278 aa-3.06□□□□□ -2.9
snR40snR40 MRS2Q01926 470 aa-3.06□□□□□ -2.9
snR40snR40 VPS20Q04272 221 aa-3.06□□□□□ -2.9
snR40snR40 UPS1Q05776 175 aa-3.06□□□□□ -2.9
snR40snR40 DCS1Q06151 350 aa-3.06□□□□□ -2.9
snR40snR40 NOP6Q07623 225 aaKnown RBP-3.06□□□□□ -2.9
snR40snR40 FAS1P07149 2051 aaKnown RBP-3.07□□□□□ -2.9
snR40snR40 MET5P47169 1442 aa-3.07□□□□□ -2.9
snR40snR40 SPO13P23624 291 aa-3.07□□□□□ -2.9
snR40snR40 YCR001WP25347 104 aa-3.07□□□□□ -2.9
snR40snR40 ASC1P38011 319 aaKnown RBP-3.07□□□□□ -2.9
snR40snR40 PEX18P38855 283 aa-3.07□□□□□ -2.9
snR40snR40 ERJ5P43613 295 aaPredicted RBP-3.07□□□□□ -2.9
snR40snR40 SAY1P53324 424 aa-3.07□□□□□ -2.9
snR40snR40 LAG2Q92325 660 aa-3.07□□□□□ -2.9
snR40snR40 MNE1P24720 663 aa-3.08□□□□□ -2.9
snR40snR40 AHT1P29589 182 aa-3.08□□□□□ -2.9
snR40snR40 KRE29P40026 464 aa-3.08□□□□□ -2.9
snR40snR40 SER2P42941 309 aa-3.08□□□□□ -2.9
snR40snR40 POP3P53833 195 aaPredicted RBP-3.08□□□□□ -2.9
snR40snR40 ARO3P14843 370 aaKnown RBP-3.09□□□□□ -2.9
snR40snR40 POF1P25576 258 aa-3.09□□□□□ -2.9
snR40snR40 PWP2P25635 923 aaKnown RBP-3.09□□□□□ -2.9
snR40snR40 ERG2P32352 222 aa-3.09□□□□□ -2.9
snR40snR40 NOP4P37838 685 aaKnown RBP-3.09□□□□□ -2.9
snR40snR40 QDR3P38227 689 aa-3.09□□□□□ -2.9
snR40snR40 TEM1P38987 245 aa-3.09□□□□□ -2.9
snR40snR40 YNL217WP40152 326 aa-3.09□□□□□ -2.9
snR40snR40 ARC15P40518 154 aaRIP-Chip data-3.09□□□□□ -2.9not detected
snR40snR40 RPL33BP41056 107 aaKnown RBP-3.09□□□□□ -2.9
snR40snR40 OKP1P53298 406 aa-3.09□□□□□ -2.9
snR40snR40 ARP5P53946 755 aa-3.09□□□□□ -2.9
snR40snR40 GTR1Q00582 310 aa-3.09□□□□□ -2.9
snR40snR40 CTF19Q02732 369 aa-3.09□□□□□ -2.9
snR40snR40 TAF11Q04226 346 aa-3.09□□□□□ -2.9
snR40snR40 YOR029WQ12243 111 aa-3.09□□□□□ -2.9
snR40snR40 SPS100P13130 326 aa-3.1□□□□□ -2.91
snR40snR40 TFC1P32367 649 aa-3.1□□□□□ -2.91
snR40snR40 CSG2P35206 410 aa-3.1□□□□□ -2.91
snR40snR40 YBR062CP38239 180 aa-3.1□□□□□ -2.91
snR40snR40 TOM22P49334 152 aa-3.11□□□□□ -2.91
snR40snR40 SPP2Q02521 185 aa-3.11□□□□□ -2.91
snR40snR40 VBA1Q04301 562 aa-3.11□□□□□ -2.91
snR40snR40 CSM3Q04659 317 aa-3.11□□□□□ -2.91
snR40snR40 ARR2Q06597 130 aa-3.11□□□□□ -2.91
snR40snR40 MSW1P04803 379 aa-3.12□□□□□ -2.91
snR40snR40 QRI5P32344 111 aa-3.12□□□□□ -2.91
snR40snR40 PTH2P34222 208 aa-3.12□□□□□ -2.91
snR40snR40 OTU2P38747 307 aaKnown RBP-3.12□□□□□ -2.91
snR40snR40 RRF1P38771 230 aa-3.12□□□□□ -2.91
snR40snR40 RTT102P53330 157 aa-3.12□□□□□ -2.91
snR40snR40 JJJ1P53863 590 aa-3.12□□□□□ -2.91
snR40snR40 YDR341CQ05506 607 aaKnown RBP-3.12□□□□□ -2.91
snR40snR40 COQ10Q08058 207 aa-3.12□□□□□ -2.91
snR40snR40 MSH5Q12175 901 aa-3.12□□□□□ -2.91
snR40snR40 TMA7Q3E764 64 aaKnown RBP-3.12□□□□□ -2.91
snR40snR40 RPL9AP05738 191 aaKnown RBP-3.13□□□□□ -2.91
snR40snR40 RPC40P07703 335 aaKnown RBP-3.13□□□□□ -2.91
snR40snR40 RRN3P36070 627 aa-3.13□□□□□ -2.91
snR40snR40 MAL32P38158 584 aa-3.13□□□□□ -2.91
snR40snR40 YBR242WP38331 238 aa-3.13□□□□□ -2.91
snR40snR40 YHI9P38765 294 aa-3.13□□□□□ -2.91
snR40snR40 YJR015WP47090 510 aa-3.13□□□□□ -2.91
snR40snR40 RPL9BP51401 191 aaKnown RBP-3.13□□□□□ -2.91
snR40snR40 TAF6P53040 516 aa-3.13□□□□□ -2.91
snR40snR40 MAL12P53341 584 aa-3.13□□□□□ -2.91
snR40snR40 VPS75P53853 264 aa-3.13□□□□□ -2.91
snR40snR40 YMR111CQ04461 462 aaPredicted RBP-3.13□□□□□ -2.91
snR40snR40 ELP6Q04868 273 aa-3.13□□□□□ -2.91
snR40snR40 AAD15Q08361 143 aa-3.13□□□□□ -2.91
snR40snR40 YOR034C-AQ3E735 80 aa-3.13□□□□□ -2.91
snR40snR40 COX5AP00424 153 aa-3.14□□□□□ -2.91
snR40snR40 HSP82P02829 709 aaKnown RBP-3.14□□□□□ -2.91
snR40snR40 RPL27BP0C2H7 136 aaKnown RBP-3.14□□□□□ -2.91
snR40snR40 CLC1P17891 233 aa-3.14□□□□□ -2.91
snR40snR40 DAL80P26343 269 aa-3.14□□□□□ -2.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms