RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W FEX1Q08913 375 aa1.15□□□□□ -2.23
YOP1YPR028W FEX2Q08991 375 aa1.15□□□□□ -2.23
YOP1YPR028W YPL150WQ12152 901 aa1.15□□□□□ -2.23
YOP1YPR028W TIM22Q12328 207 aa1.15□□□□□ -2.23
YOP1YPR028W ATG5Q12380 294 aa1.15□□□□□ -2.23
YOP1YPR028W NUP157P40064 1391 aaKnown RBP1.14□□□□□ -2.23
YOP1YPR028W YEL009C-AA0A023PZF2 135 aa1.14□□□□□ -2.23
YOP1YPR028W TDH2P00358 332 aaKnown RBP1.14□□□□□ -2.23
YOP1YPR028W RPS3P05750 240 aaKnown RBP1.14□□□□□ -2.23
YOP1YPR028W KRE1P17260 313 aa1.14□□□□□ -2.23
YOP1YPR028W ATG15P25641 520 aa1.14□□□□□ -2.23
YOP1YPR028W PEX3P28795 441 aa1.14□□□□□ -2.23
YOP1YPR028W UTR5P32630 166 aa1.14□□□□□ -2.23
YOP1YPR028W PPQ1P32945 549 aa1.14□□□□□ -2.23
YOP1YPR028W YKR032WP36127 104 aa1.14□□□□□ -2.23
YOP1YPR028W YBL081WP38180 368 aaKnown RBP1.14□□□□□ -2.23
YOP1YPR028W SPL2P38839 148 aa1.14□□□□□ -2.23
YOP1YPR028W SUR2P38992 349 aa1.14□□□□□ -2.23
YOP1YPR028W SHC1P39000 512 aa1.14□□□□□ -2.23
YOP1YPR028W PEX31P53203 462 aa1.14□□□□□ -2.23
YOP1YPR028W TIM21P53220 239 aa1.14□□□□□ -2.23
YOP1YPR028W LSB1P53281 241 aa1.14□□□□□ -2.23
YOP1YPR028W VBA1Q04301 562 aa1.14□□□□□ -2.23
YOP1YPR028W GMC2Q06201 188 aa1.14□□□□□ -2.23
YOP1YPR028W PER33Q12144 273 aa1.14□□□□□ -2.23
YOP1YPR028W YOS9Q99220 542 aa1.14□□□□□ -2.23
YOP1YPR028W RPL24AP04449 155 aaKnown RBP1.13□□□□□ -2.23
YOP1YPR028W HIS3P06633 220 aa1.13□□□□□ -2.23
YOP1YPR028W OM45P16547 393 aa1.13□□□□□ -2.23
YOP1YPR028W RRT12P25381 491 aa1.13□□□□□ -2.23
YOP1YPR028W BMH1P29311 267 aaKnown RBP1.13□□□□□ -2.23
YOP1YPR028W CSG2P35206 410 aa1.13□□□□□ -2.23
YOP1YPR028W HSM3P38348 480 aa1.13□□□□□ -2.23
YOP1YPR028W PET100P38958 111 aa1.13□□□□□ -2.23
YOP1YPR028W SCC4P40090 624 aa1.13□□□□□ -2.23
YOP1YPR028W TAD2P47058 250 aa1.13□□□□□ -2.23
YOP1YPR028W OST3P48439 350 aa1.13□□□□□ -2.23
YOP1YPR028W KAP114P53067 1004 aa1.13□□□□□ -2.23
YOP1YPR028W FMP41P53889 259 aaKnown RBP1.13□□□□□ -2.23
YOP1YPR028W YNL095CP53932 642 aa1.13□□□□□ -2.23
YOP1YPR028W SDC1Q03323 175 aa1.13□□□□□ -2.23
YOP1YPR028W ISD11Q6Q560 94 aa1.13□□□□□ -2.23
YOP1YPR028W SSK22P25390 1331 aaPredicted RBP1.13□□□□□ -2.23
YOP1YPR028W RPL4AP10664 362 aaKnown RBP1.12□□□□□ -2.23
YOP1YPR028W MET16P18408 261 aaPredicted RBP1.12□□□□□ -2.23
YOP1YPR028W POF1P25576 258 aa1.12□□□□□ -2.23
YOP1YPR028W HMT1P38074 348 aa1.12□□□□□ -2.23
YOP1YPR028W RCY1P39531 840 aa1.12□□□□□ -2.23
YOP1YPR028W NPT1P39683 429 aaKnown RBP1.12□□□□□ -2.23
YOP1YPR028W YER084WP40057 128 aa1.12□□□□□ -2.23
YOP1YPR028W RTT105P40063 208 aa1.12□□□□□ -2.23
YOP1YPR028W SER33P40510 469 aa1.12□□□□□ -2.23
YOP1YPR028W GPI8P49018 411 aa1.12□□□□□ -2.23
YOP1YPR028W RPL4BP49626 362 aaKnown RBP1.12□□□□□ -2.23
YOP1YPR028W SLX9P53251 210 aaPredicted RBP1.12□□□□□ -2.23
YOP1YPR028W SYF2P53277 215 aaPredicted RBP1.12□□□□□ -2.23
YOP1YPR028W YPL039WQ03080 316 aa1.12□□□□□ -2.23
YOP1YPR028W CTR3Q06686 241 aa1.12□□□□□ -2.23
YOP1YPR028W CLP1Q08685 445 aaPredicted RBP1.12□□□□□ -2.23
YOP1YPR028W SME1Q12330 94 aaPredicted RBP1.12□□□□□ -2.23
YOP1YPR028W PAN1P32521 1480 aa1.12□□□□□ -2.23
YOP1YPR028W HIS1P00498 297 aaKnown RBP1.11□□□□□ -2.23
YOP1YPR028W RPP0P05317 312 aaKnown RBP1.11□□□□□ -2.23
YOP1YPR028W MRPL37P36532 105 aa1.11□□□□□ -2.23
YOP1YPR028W ATG12P38316 186 aa1.11□□□□□ -2.23
YOP1YPR028W ARN2P38724 620 aa1.11□□□□□ -2.23
YOP1YPR028W SPT8P38915 602 aa1.11□□□□□ -2.23
YOP1YPR028W DDI1P40087 428 aa1.11□□□□□ -2.23
YOP1YPR028W COA1P40452 197 aa1.11□□□□□ -2.23
YOP1YPR028W YJR141WP47172 347 aaPredicted RBP1.11□□□□□ -2.23
YOP1YPR028W MNT4P53745 580 aa1.11□□□□□ -2.23
YOP1YPR028W SWS2P53937 143 aa1.11□□□□□ -2.23
YOP1YPR028W MIX17Q03667 156 aa1.11□□□□□ -2.23
YOP1YPR028W FCF1Q05498 189 aaPredicted RBP1.11□□□□□ -2.23
YOP1YPR028W LOA1Q06508 300 aa1.11□□□□□ -2.23
YOP1YPR028W ARV1Q06541 321 aa1.11□□□□□ -2.23
YOP1YPR028W CDD1Q06549 142 aa1.11□□□□□ -2.23
YOP1YPR028W YOL019WQ08157 551 aa1.11□□□□□ -2.23
YOP1YPR028W SMT3Q12306 101 aaKnown RBP1.11□□□□□ -2.23
YOP1YPR028W AI5_BETAQ9ZZX0 354 aa1.11□□□□□ -2.23
YOP1YPR028W STH1P32597 1359 aa1.1□□□□□ -2.23
YOP1YPR028W BEM2P39960 2167 aaKnown RBP1.1□□□□□ -2.23
YOP1YPR028W MRP1P10662 321 aaKnown RBP1.1□□□□□ -2.23
YOP1YPR028W SFC1P33303 322 aa1.1□□□□□ -2.23
YOP1YPR028W DRE2P36152 348 aa1.1□□□□□ -2.23
YOP1YPR028W HEK2P38199 381 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
YOP1YPR028W TEM1P38987 245 aa1.1□□□□□ -2.23
YOP1YPR028W PRM9P39551 298 aa1.1□□□□□ -2.23
YOP1YPR028W YER188WP40103 239 aa1.1□□□□□ -2.23
YOP1YPR028W AGX1P43567 385 aa1.1□□□□□ -2.23
YOP1YPR028W YJR012CP47087 207 aa1.1□□□□□ -2.23
YOP1YPR028W NBP35P52920 328 aa1.1□□□□□ -2.23
YOP1YPR028W NIF3P53081 288 aa1.1□□□□□ -2.23
YOP1YPR028W MPP6P53725 186 aaPredicted RBP1.1□□□□□ -2.23
YOP1YPR028W AAH1P53909 347 aa1.1□□□□□ -2.23
YOP1YPR028W CDC14Q00684 551 aa1.1□□□□□ -2.23
YOP1YPR028W ATC1Q04005 294 aa1.1□□□□□ -2.23
YOP1YPR028W PEX10Q05568 337 aa1.1□□□□□ -2.23
YOP1YPR028W YBL112CQ3E7Y4 105 aa1.1□□□□□ -2.23
YOP1YPR028W COX2P00410 251 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 81.8 ms