RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W OST3P48439 350 aa5.67□□□□□ -1.5
CIT3YPR001W RSC9Q03124 581 aa5.67□□□□□ -1.5
CIT3YPR001W MCT1Q12283 360 aa5.67□□□□□ -1.5
CIT3YPR001W YDL199CQ12407 687 aa5.67□□□□□ -1.5
CIT3YPR001W PHO80P20052 293 aa5.66□□□□□ -1.5
CIT3YPR001W GIT1P25346 518 aa5.66□□□□□ -1.5
CIT3YPR001W SPS18P32572 300 aa5.66□□□□□ -1.5
CIT3YPR001W SGE1P33335 543 aa5.66□□□□□ -1.5
CIT3YPR001W GOS1P38736 223 aa5.66□□□□□ -1.5
CIT3YPR001W YHR127WP38833 243 aaKnown RBP5.66□□□□□ -1.5
CIT3YPR001W CHS7P38843 316 aa5.66□□□□□ -1.5
CIT3YPR001W PET8P38921 284 aa5.66□□□□□ -1.5
CIT3YPR001W GIM4P40005 111 aaKnown RBP5.66□□□□□ -1.5
CIT3YPR001W SER33P40510 469 aa5.66□□□□□ -1.5
CIT3YPR001W YIL029CP40538 142 aa5.66□□□□□ -1.5
CIT3YPR001W CFD1P40558 293 aa5.66□□□□□ -1.5
CIT3YPR001W NRK1P53915 240 aa5.66□□□□□ -1.5
CIT3YPR001W VPS60Q03390 229 aa5.66□□□□□ -1.5
CIT3YPR001W TDA1Q03533 586 aa5.66□□□□□ -1.5
CIT3YPR001W ECM11Q04110 302 aa5.66□□□□□ -1.5
CIT3YPR001W YET2Q04210 160 aa5.66□□□□□ -1.5
CIT3YPR001W ORM2Q06144 216 aa5.66□□□□□ -1.5
CIT3YPR001W YDL114WQ07530 308 aa5.66□□□□□ -1.5
CIT3YPR001W COQ10Q08058 207 aa5.66□□□□□ -1.5
CIT3YPR001W HNT3Q08702 217 aa5.66□□□□□ -1.5
CIT3YPR001W FCY22Q12119 530 aa5.66□□□□□ -1.5
CIT3YPR001W YDR018CQ12185 396 aa5.66□□□□□ -1.5
CIT3YPR001W RFM1Q12192 310 aa5.66□□□□□ -1.5
CIT3YPR001W TPO4Q12256 659 aa5.66□□□□□ -1.5
CIT3YPR001W PET20Q99373 253 aa5.66□□□□□ -1.5
CIT3YPR001W RPL42AP0CX27 106 aaKnown RBP5.65□□□□□ -1.5
CIT3YPR001W RPL42BP0CX28 106 aaKnown RBP5.65□□□□□ -1.5
CIT3YPR001W ASP3-2P0CX77 362 aa5.65□□□□□ -1.5
CIT3YPR001W ASP3-3P0CX78 362 aa5.65□□□□□ -1.5
CIT3YPR001W ASP3-4P0CX79 362 aa5.65□□□□□ -1.5
CIT3YPR001W ASP3-1P0CZ17 362 aa5.65□□□□□ -1.5
CIT3YPR001W FUN26P31381 517 aa5.65□□□□□ -1.5
CIT3YPR001W AEP1P32493 518 aa5.65□□□□□ -1.5
CIT3YPR001W MRPL3P36516 390 aa5.65□□□□□ -1.5
CIT3YPR001W DER1P38307 211 aa5.65□□□□□ -1.5
CIT3YPR001W MCM22P47167 239 aa5.65□□□□□ -1.5
CIT3YPR001W SCS7Q03529 384 aa5.65□□□□□ -1.5
CIT3YPR001W YML018CQ03730 393 aa5.65□□□□□ -1.5
CIT3YPR001W YPR091CQ06833 770 aa5.65□□□□□ -1.5
CIT3YPR001W LSO2Q3E772 92 aaKnown RBP5.65□□□□□ -1.5
CIT3YPR001W CBS2P14905 389 aa5.64□□□□□ -1.51
CIT3YPR001W CPT1P17898 393 aa5.64□□□□□ -1.51
CIT3YPR001W HMT1P38074 348 aa5.64□□□□□ -1.51
CIT3YPR001W YBP1P38315 674 aa5.64□□□□□ -1.51
CIT3YPR001W MAM33P40513 266 aa5.64□□□□□ -1.51
CIT3YPR001W MOB2P43563 287 aa5.64□□□□□ -1.51
CIT3YPR001W PDR17P53844 350 aa5.64□□□□□ -1.51
CIT3YPR001W RPS18AP0CX55 146 aaKnown RBP5.64□□□□□ -1.51
CIT3YPR001W RPS18BP0CX56 146 aaPredicted RBP5.64□□□□□ -1.51
CIT3YPR001W MIR1P23641 311 aaKnown RBP5.64□□□□□ -1.51
CIT3YPR001W MED8P38304 223 aa5.64□□□□□ -1.51
CIT3YPR001W ARC40P38328 384 aaKnown RBP5.64□□□□□ -1.51
CIT3YPR001W RCK1P38622 512 aa5.64□□□□□ -1.51
CIT3YPR001W FLO5P38894 1075 aa5.64□□□□□ -1.51
CIT3YPR001W PEX22P39718 180 aa5.64□□□□□ -1.51
CIT3YPR001W YIL024CP40543 189 aa5.64□□□□□ -1.51
CIT3YPR001W YJR056CP47115 236 aa5.64□□□□□ -1.51
CIT3YPR001W SBH2P52871 88 aa5.64□□□□□ -1.51
CIT3YPR001W YGL235WP53071 178 aa5.64□□□□□ -1.51
CIT3YPR001W YGL039WP53183 348 aaKnown RBP5.64□□□□□ -1.51
CIT3YPR001W JAC1P53193 184 aa5.64□□□□□ -1.51
CIT3YPR001W MRPL20P22354 195 aaPredicted RBP5.63□□□□□ -1.51
CIT3YPR001W MRP21P38175 177 aa5.63□□□□□ -1.51
CIT3YPR001W MOH1P38191 138 aa5.63□□□□□ -1.51
CIT3YPR001W ECM13P38195 257 aa5.63□□□□□ -1.51
CIT3YPR001W MSO1P53604 210 aaKnown RBP5.63□□□□□ -1.51
CIT3YPR001W YMR279CQ03263 540 aa5.63□□□□□ -1.51
CIT3YPR001W YMR254CQ04838 102 aa5.63□□□□□ -1.51
CIT3YPR001W FAR10Q06001 478 aa5.63□□□□□ -1.51
CIT3YPR001W NOC4Q06512 552 aaPredicted RBP5.63□□□□□ -1.51
CIT3YPR001W YPR147CQ06522 304 aaKnown RBP5.63□□□□□ -1.51
CIT3YPR001W ATX2Q12067 313 aa5.63□□□□□ -1.51
CIT3YPR001W CRC1Q12289 327 aa5.63□□□□□ -1.51
CIT3YPR001W BI3Q9ZZW7 517 aa5.63□□□□□ -1.51
CIT3YPR001W MHP1P43638 1398 aa5.62□□□□□ -1.51
CIT3YPR001W YKR104WP0CE69 306 aa5.62□□□□□ -1.51
CIT3YPR001W OAR1P35731 278 aa5.62□□□□□ -1.51
CIT3YPR001W NAT2P37293 288 aa5.62□□□□□ -1.51
CIT3YPR001W AGE2P40529 298 aa5.62□□□□□ -1.51
CIT3YPR001W TPS1Q00764 495 aaKnown RBP5.62□□□□□ -1.51
CIT3YPR001W NUP49Q02199 472 aa5.62□□□□□ -1.51
CIT3YPR001W SPG4Q04438 115 aa5.62□□□□□ -1.51
CIT3YPR001W INM2Q05533 292 aa5.62□□□□□ -1.51
CIT3YPR001W GRX8Q05926 109 aa5.62□□□□□ -1.51
CIT3YPR001W SEI1Q06058 285 aa5.62□□□□□ -1.51
CIT3YPR001W NSL1Q12143 216 aa5.62□□□□□ -1.51
CIT3YPR001W RIO1Q12196 484 aaKnown RBP5.62□□□□□ -1.51
CIT3YPR001W USB1Q12208 290 aaKnown RBP5.62□□□□□ -1.51
CIT3YPR001W RPS14AP06367 137 aaKnown RBP5.61□□□□□ -1.51
CIT3YPR001W YOL163WP0CF20 169 aa5.61□□□□□ -1.51
CIT3YPR001W DPM1P14020 267 aaKnown RBP5.61□□□□□ -1.51
CIT3YPR001W YAP1P19880 650 aaKnown RBP5.61□□□□□ -1.51
CIT3YPR001W PMU1P36069 295 aa5.61□□□□□ -1.51
CIT3YPR001W HEK2P38199 381 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
CIT3YPR001W MDM31P38880 579 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 173.9 ms