RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W YBL059WP34224 193 aa3.88□□□□□ -1.79
BDP1YNL039W PRE6P40303 254 aaKnown RBP3.88□□□□□ -1.79
BDP1YNL039W REE1P40893 198 aa3.88□□□□□ -1.79
BDP1YNL039W SDS23P53172 527 aa3.88□□□□□ -1.79
BDP1YNL039W YGR015CP53208 328 aa3.88□□□□□ -1.79
BDP1YNL039W YDR222WQ04925 415 aa3.88□□□□□ -1.79
BDP1YNL039W YOR292CQ08743 309 aa3.88□□□□□ -1.79
BDP1YNL039W SRO7Q12038 1033 aa3.88□□□□□ -1.79
BDP1YNL039W VIK1Q12045 647 aa3.88□□□□□ -1.79
BDP1YNL039W HTB1P02293 131 aaKnown RBP3.87□□□□□ -1.79
BDP1YNL039W HTB2P02294 131 aa3.87□□□□□ -1.79
BDP1YNL039W ADE1P27616 306 aa3.87□□□□□ -1.79
BDP1YNL039W IDH1P28834 360 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
BDP1YNL039W MRP21P38175 177 aa3.87□□□□□ -1.79
BDP1YNL039W CTF19Q02732 369 aa3.87□□□□□ -1.79
BDP1YNL039W YPR098CQ06089 161 aa3.87□□□□□ -1.79
BDP1YNL039W YLR177WQ06251 628 aa3.87□□□□□ -1.79
BDP1YNL039W RRS1Q08746 203 aaKnown RBP3.87□□□□□ -1.79
BDP1YNL039W YBR298C-AQ8TGK4 73 aa3.87□□□□□ -1.79
BDP1YNL039W YDR157WA0A023PZE8 133 aa3.86□□□□□ -1.79
BDP1YNL039W PHO2P07269 559 aa3.86□□□□□ -1.79
BDP1YNL039W SPT15P13393 240 aaKnown RBP3.86□□□□□ -1.79
BDP1YNL039W CDC10P25342 322 aaKnown RBP3.86□□□□□ -1.79
BDP1YNL039W EHD3P28817 500 aa3.86□□□□□ -1.79
BDP1YNL039W SSO1P32867 290 aa3.86□□□□□ -1.79
BDP1YNL039W SHE1P38200 338 aa3.86□□□□□ -1.79
BDP1YNL039W YBR096WP38256 230 aa3.86□□□□□ -1.79
BDP1YNL039W FZO1P38297 855 aa3.86□□□□□ -1.79
BDP1YNL039W MBA1P38300 278 aa3.86□□□□□ -1.79
BDP1YNL039W MIC26P50087 233 aa3.86□□□□□ -1.79
BDP1YNL039W RMR1P53060 241 aa3.86□□□□□ -1.79
BDP1YNL039W COG7P53195 279 aa3.86□□□□□ -1.79
BDP1YNL039W LOA1Q06508 300 aa3.86□□□□□ -1.79
BDP1YNL039W TIP41Q12199 356 aa3.86□□□□□ -1.79
BDP1YNL039W CMC2Q3E7A4 109 aa3.86□□□□□ -1.79
BDP1YNL039W ARO2P28777 376 aaKnown RBP3.86□□□□□ -1.79
BDP1YNL039W ATP7P30902 174 aa3.86□□□□□ -1.79
BDP1YNL039W GET1P53192 235 aa3.86□□□□□ -1.79
BDP1YNL039W NOP19P53317 196 aaPredicted RBP3.86□□□□□ -1.79
BDP1YNL039W YMR166CQ03829 368 aa3.86□□□□□ -1.79
BDP1YNL039W YET2Q04210 160 aa3.86□□□□□ -1.79
BDP1YNL039W YMR114CQ04471 368 aaKnown RBP3.86□□□□□ -1.79
BDP1YNL039W ARC18Q05933 178 aaKnown RBP3.86□□□□□ -1.79
BDP1YNL039W YKL075CP36083 450 aa3.85□□□□□ -1.79
BDP1YNL039W MED8P38304 223 aa3.85□□□□□ -1.79
BDP1YNL039W IKI1P38874 309 aa3.85□□□□□ -1.79
BDP1YNL039W EGD2P38879 174 aaKnown RBP3.85□□□□□ -1.79
BDP1YNL039W OXA1P39952 402 aa3.85□□□□□ -1.79
BDP1YNL039W JLP1Q12358 412 aa3.85□□□□□ -1.79
BDP1YNL039W YCL012CQ8J0M4 134 aa3.85□□□□□ -1.79
BDP1YNL039W RPL4AP10664 362 aaKnown RBP3.84□□□□□ -1.79
BDP1YNL039W BGL2P15703 313 aaKnown RBP3.84□□□□□ -1.79
BDP1YNL039W RFA3P26755 122 aaKnown RBP3.84□□□□□ -1.79
BDP1YNL039W NTF2P33331 125 aaKnown RBP3.84□□□□□ -1.79
BDP1YNL039W PRX1P34227 261 aaKnown RBP3.84□□□□□ -1.79
BDP1YNL039W EFM1P38732 585 aa3.84□□□□□ -1.79
BDP1YNL039W YIL001WP40560 513 aa3.84□□□□□ -1.79
BDP1YNL039W RPL4BP49626 362 aaKnown RBP3.84□□□□□ -1.79
BDP1YNL039W MGA1P53050 456 aa3.84□□□□□ -1.79
BDP1YNL039W EFM5P53200 248 aaKnown RBP3.84□□□□□ -1.79
BDP1YNL039W GIM5Q04493 163 aa3.84□□□□□ -1.79
BDP1YNL039W ATG17Q06410 417 aa3.84□□□□□ -1.79
BDP1YNL039W COQ10Q08058 207 aa3.84□□□□□ -1.79
BDP1YNL039W RFM1Q12192 310 aa3.84□□□□□ -1.79
BDP1YNL039W DCN1Q12395 269 aa3.84□□□□□ -1.79
BDP1YNL039W RPL21BQ12672 160 aaKnown RBP3.84□□□□□ -1.79
BDP1YNL039W AAT2P23542 418 aaKnown RBP3.84□□□□□ -1.8
BDP1YNL039W ATG15P25641 520 aa3.84□□□□□ -1.8
BDP1YNL039W SPS19P32573 292 aaKnown RBP3.84□□□□□ -1.8
BDP1YNL039W SOL2P37262 315 aa3.84□□□□□ -1.8
BDP1YNL039W GOS1P38736 223 aa3.84□□□□□ -1.8
BDP1YNL039W BAT1P38891 393 aaKnown RBP3.84□□□□□ -1.8
BDP1YNL039W FRT2P39734 528 aa3.84□□□□□ -1.8
BDP1YNL039W STB1P42845 420 aa3.84□□□□□ -1.8
BDP1YNL039W ADO1P47143 340 aaKnown RBP3.84□□□□□ -1.8
BDP1YNL039W NIF3P53081 288 aa3.84□□□□□ -1.8
BDP1YNL039W RNH201P53942 307 aa3.84□□□□□ -1.8
BDP1YNL039W DIA1P54005 336 aa3.84□□□□□ -1.8
BDP1YNL039W RHO3Q00245 231 aaKnown RBP3.84□□□□□ -1.8
BDP1YNL039W SDC1Q03323 175 aa3.84□□□□□ -1.8
BDP1YNL039W FAR8Q05040 523 aa3.84□□□□□ -1.8
BDP1YNL039W CDD1Q06549 142 aa3.84□□□□□ -1.8
BDP1YNL039W YOR376WQ08900 122 aa3.84□□□□□ -1.8
BDP1YNL039W IKI3Q06706 1349 aaKnown RBP3.83□□□□□ -1.8
BDP1YNL039W YMR316C-AI2HB70 103 aa3.83□□□□□ -1.8
BDP1YNL039W QCR7P00128 127 aa3.83□□□□□ -1.8
BDP1YNL039W RPL28P02406 149 aaKnown RBP3.83□□□□□ -1.8
BDP1YNL039W GDH2P33327 1092 aaKnown RBP3.83□□□□□ -1.8
BDP1YNL039W FRM2P37261 193 aa3.83□□□□□ -1.8
BDP1YNL039W HEK2P38199 381 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
BDP1YNL039W RFS1P38234 210 aaKnown RBP3.83□□□□□ -1.8
BDP1YNL039W WSC4P38739 605 aa3.83□□□□□ -1.8
BDP1YNL039W TIM17P39515 158 aa3.83□□□□□ -1.8
BDP1YNL039W YMR317WQ04893 1140 aa3.83□□□□□ -1.8
BDP1YNL039W MMT2Q08970 484 aa3.83□□□□□ -1.8
BDP1YNL039W ASP3-2P0CX77 362 aa3.82□□□□□ -1.8
BDP1YNL039W ASP3-3P0CX78 362 aa3.82□□□□□ -1.8
BDP1YNL039W ASP3-4P0CX79 362 aa3.82□□□□□ -1.8
BDP1YNL039W ASP3-1P0CZ17 362 aa3.82□□□□□ -1.8
BDP1YNL039W CDC50P25656 391 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms