RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W SPT4P32914 102 aaPredicted RBP1.38□□□□□ -2.19
CTK3YML112W NRG2P38082 220 aa1.38□□□□□ -2.19
CTK3YML112W NAS2P40555 220 aa1.38□□□□□ -2.19
CTK3YML112W OST3P48439 350 aa1.38□□□□□ -2.19
CTK3YML112W RIB7P33312 244 aa1.37□□□□□ -2.19
CTK3YML112W RPC25P35718 212 aa1.37□□□□□ -2.19
CTK3YML112W YJR146WP47174 117 aa1.37□□□□□ -2.19
CTK3YML112W RIB4P50861 169 aaPredicted RBP1.37□□□□□ -2.19
CTK3YML112W SLM2P53955 656 aa1.37□□□□□ -2.19
CTK3YML112W VPS20Q04272 221 aa1.37□□□□□ -2.19
CTK3YML112W TAZ1Q06510 381 aa1.37□□□□□ -2.19
CTK3YML112W ARV1Q06541 321 aa1.37□□□□□ -2.19
CTK3YML112W BER1Q06688 274 aaKnown RBP1.37□□□□□ -2.19
CTK3YML112W YOL019WQ08157 551 aa1.37□□□□□ -2.19
CTK3YML112W REX3Q12090 404 aa1.37□□□□□ -2.19
CTK3YML112W QCR6P00127 147 aa1.36□□□□□ -2.19
CTK3YML112W STF1P01098 86 aa1.36□□□□□ -2.19
CTK3YML112W ADH3P07246 375 aaKnown RBP1.36□□□□□ -2.19
CTK3YML112W RPC40P07703 335 aaKnown RBP1.36□□□□□ -2.19
CTK3YML112W DPM1P14020 267 aaKnown RBP1.36□□□□□ -2.19
CTK3YML112W SFC1P33303 322 aa1.36□□□□□ -2.19
CTK3YML112W YHL026CP38740 315 aa1.36□□□□□ -2.19
CTK3YML112W RRF1P38771 230 aa1.36□□□□□ -2.19
CTK3YML112W DAN1P47178 298 aa1.36□□□□□ -2.19
CTK3YML112W RAD17P48581 401 aa1.36□□□□□ -2.19
CTK3YML112W MND1P53102 219 aa1.36□□□□□ -2.19
CTK3YML112W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
CTK3YML112W VPS60Q03390 229 aa1.36□□□□□ -2.19
CTK3YML112W YMR111CQ04461 462 aaPredicted RBP1.36□□□□□ -2.19
CTK3YML112W RNH1Q04740 348 aa1.36□□□□□ -2.19
CTK3YML112W RRG8Q06109 277 aa1.36□□□□□ -2.19
CTK3YML112W CTS2Q06350 511 aa1.36□□□□□ -2.19
CTK3YML112W YOR114WQ12219 294 aa1.36□□□□□ -2.19
CTK3YML112W EMC6Q12431 108 aa1.36□□□□□ -2.19
CTK3YML112W RRP36Q12481 300 aaPredicted RBP1.36□□□□□ -2.19
CTK3YML112W AGC1Q12482 902 aa1.36□□□□□ -2.19
CTK3YML112W RTT105P40063 208 aa1.35□□□□□ -2.19
CTK3YML112W COG3P40094 801 aa1.35□□□□□ -2.19
CTK3YML112W SHQ1P40486 507 aaPredicted RBP1.35□□□□□ -2.19
CTK3YML112W MRPL49P40858 161 aaPredicted RBP1.35□□□□□ -2.19
CTK3YML112W AGP3P43548 558 aa1.35□□□□□ -2.19
CTK3YML112W AGX1P43567 385 aa1.35□□□□□ -2.19
CTK3YML112W TAD2P47058 250 aa1.35□□□□□ -2.19
CTK3YML112W YJL016WP47072 561 aa1.35□□□□□ -2.19
CTK3YML112W DBP6P53734 629 aaKnown RBP1.35□□□□□ -2.19
CTK3YML112W ECM18Q04623 453 aa1.35□□□□□ -2.19
CTK3YML112W FCF1Q05498 189 aaPredicted RBP1.35□□□□□ -2.19
CTK3YML112W ATP6P00854 259 aa1.34□□□□□ -2.19
CTK3YML112W RAD10P06838 210 aa1.34□□□□□ -2.19
CTK3YML112W DPB2P24482 689 aaPredicted RBP1.34□□□□□ -2.19
CTK3YML112W CSM1P25651 190 aa1.34□□□□□ -2.19
CTK3YML112W CSG2P35206 410 aa1.34□□□□□ -2.19
CTK3YML112W DRE2P36152 348 aa1.34□□□□□ -2.19
CTK3YML112W HIS2P38635 335 aa1.34□□□□□ -2.19
CTK3YML112W OSW5P40219 148 aa1.34□□□□□ -2.19
CTK3YML112W CDC40P40968 455 aaPredicted RBP1.34□□□□□ -2.19
CTK3YML112W YFR054CP43622 192 aa1.34□□□□□ -2.19
CTK3YML112W NIF3P53081 288 aa1.34□□□□□ -2.19
CTK3YML112W COS6P53344 381 aa1.34□□□□□ -2.19
CTK3YML112W ABZ2Q03266 374 aa1.34□□□□□ -2.19
CTK3YML112W SMD2Q06217 110 aaKnown RBP1.34□□□□□ -2.19
CTK3YML112W VAC14Q06708 880 aa1.34□□□□□ -2.19
CTK3YML112W SMT3Q12306 101 aaKnown RBP1.34□□□□□ -2.19
CTK3YML112W PST1Q12355 444 aa1.34□□□□□ -2.19
CTK3YML112W YHR086W-AQ3E746 53 aa1.34□□□□□ -2.19
CTK3YML112W SAC3P46674 1301 aa1.34□□□□□ -2.2
CTK3YML112W MER1P16523 270 aa1.33□□□□□ -2.2
CTK3YML112W PEX3P28795 441 aa1.33□□□□□ -2.2
CTK3YML112W RNP1P32385 249 aa1.33□□□□□ -2.2
CTK3YML112W GRE3P38715 327 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
CTK3YML112W ARN2P38724 620 aa1.33□□□□□ -2.2
CTK3YML112W YDR089WP38966 869 aa1.33□□□□□ -2.2
CTK3YML112W TEM1P38987 245 aa1.33□□□□□ -2.2
CTK3YML112W MNN9P39107 395 aaKnown RBP1.33□□□□□ -2.2
CTK3YML112W YER034WP40022 185 aaKnown RBP1.33□□□□□ -2.2
CTK3YML112W SLX9P53251 210 aaPredicted RBP1.33□□□□□ -2.2
CTK3YML112W YPL039WQ03080 316 aa1.33□□□□□ -2.2
CTK3YML112W SLD7Q08457 257 aa1.33□□□□□ -2.2
CTK3YML112W YAL064W-BO13512 126 aa1.32□□□□□ -2.2
CTK3YML112W ARG80P07249 177 aa1.32□□□□□ -2.2
CTK3YML112W PET494P07390 489 aaPredicted RBP1.32□□□□□ -2.2
CTK3YML112W MRPL25P23369 157 aa1.32□□□□□ -2.2
CTK3YML112W GPI12P23797 304 aa1.32□□□□□ -2.2
CTK3YML112W DAL80P26343 269 aa1.32□□□□□ -2.2
CTK3YML112W MAL32P38158 584 aa1.32□□□□□ -2.2
CTK3YML112W RPL10P41805 221 aaKnown RBP1.32□□□□□ -2.2
CTK3YML112W GON7P46984 123 aa1.32□□□□□ -2.2
CTK3YML112W YJL118WP47022 219 aa1.32□□□□□ -2.2
CTK3YML112W TIM21P53220 239 aa1.32□□□□□ -2.2
CTK3YML112W CPD1P53314 239 aa1.32□□□□□ -2.2
CTK3YML112W MAL12P53341 584 aa1.32□□□□□ -2.2
CTK3YML112W ERV25P54837 211 aaKnown RBP1.32□□□□□ -2.2
CTK3YML112W YMR114CQ04471 368 aaKnown RBP1.32□□□□□ -2.2
CTK3YML112W DCR2Q05924 578 aa1.32□□□□□ -2.2
CTK3YML112W SEC10Q06245 871 aa1.32□□□□□ -2.2
CTK3YML112W PER33Q12144 273 aa1.32□□□□□ -2.2
CTK3YML112W MDY2Q12285 212 aa1.32□□□□□ -2.2
CTK3YML112W PUT1P09368 476 aa1.31□□□□□ -2.2
CTK3YML112W OM45P16547 393 aa1.31□□□□□ -2.2
CTK3YML112W ATG15P25641 520 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms