RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C IMG1P25626 169 aa10.03□□□□□ -0.8
SPT8YLR055C IKI1P38874 309 aa10.03□□□□□ -0.8
SPT8YLR055C PHO90P39535 881 aa10.03□□□□□ -0.8
SPT8YLR055C YHC3P47040 408 aa10.03□□□□□ -0.8
SPT8YLR055C YOR385WQ08909 290 aa10.03□□□□□ -0.8
SPT8YLR055C MMT2Q08970 484 aa10.03□□□□□ -0.8
SPT8YLR055C MMP1Q12372 583 aa10.03□□□□□ -0.8
SPT8YLR055C SSH4P32343 579 aa10.02□□□□□ -0.81
SPT8YLR055C OMA1P36163 345 aa10.02□□□□□ -0.81
SPT8YLR055C ASP1P38986 381 aaPredicted RBP10.02□□□□□ -0.81
SPT8YLR055C UME6P39001 836 aa10.02□□□□□ -0.81
SPT8YLR055C SNO4Q04902 237 aa10.02□□□□□ -0.81
SPT8YLR055C AIM6Q07716 390 aa10.02□□□□□ -0.81
SPT8YLR055C HSP33Q08914 237 aaKnown RBP10.02□□□□□ -0.81
SPT8YLR055C HSP32Q08992 237 aa10.02□□□□□ -0.81
SPT8YLR055C YCR006CP25350 157 aa10.01□□□□□ -0.81
SPT8YLR055C SUI1P32911 108 aaKnown RBP10.01□□□□□ -0.81
SPT8YLR055C MDL1P33310 695 aa10.01□□□□□ -0.81
SPT8YLR055C KAE1P36132 386 aa10.01□□□□□ -0.81
SPT8YLR055C BFR1P38934 470 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
SPT8YLR055C SMB1P40018 196 aaKnown RBP10.01□□□□□ -0.81
SPT8YLR055C YIL166CP40445 542 aa10.01□□□□□ -0.81
SPT8YLR055C LYS20P48570 428 aaKnown RBP10.01□□□□□ -0.81
SPT8YLR055C YGL235WP53071 178 aa10.01□□□□□ -0.81
SPT8YLR055C GIC2Q06648 383 aa10.01□□□□□ -0.81
SPT8YLR055C DAL82P21705 255 aa10□□□□□ -0.81
SPT8YLR055C CWH43P25618 953 aa10□□□□□ -0.81
SPT8YLR055C YKL162CP36052 402 aa10□□□□□ -0.81
SPT8YLR055C YIL060WP40519 144 aa10□□□□□ -0.81
SPT8YLR055C VNX1P42839 908 aa10□□□□□ -0.81
SPT8YLR055C YGL204CP53089 101 aa10□□□□□ -0.81
SPT8YLR055C TYW3P53177 273 aa10□□□□□ -0.81
SPT8YLR055C BNA7Q04066 261 aa10□□□□□ -0.81
SPT8YLR055C CAC2Q04199 468 aa10□□□□□ -0.81
SPT8YLR055C NOC4Q06512 552 aaPredicted RBP10□□□□□ -0.81
SPT8YLR055C GUP2Q08929 609 aa10□□□□□ -0.81
SPT8YLR055C HBN1Q96VH4 193 aa10□□□□□ -0.81
SPT8YLR055C Q0142Q9ZZW4 58 aa10□□□□□ -0.81
SPT8YLR055C SSA3P09435 649 aaKnown RBP10□□□□□ -0.81
SPT8YLR055C TY1A-LR4P0C2I8 440 aaKnown RBP10□□□□□ -0.81
SPT8YLR055C TY1A-DR6P0CX70 440 aa10□□□□□ -0.81
SPT8YLR055C TY1A-ER1P0CX71 440 aa10□□□□□ -0.81
SPT8YLR055C TY1A-LR2P0CX72 440 aa10□□□□□ -0.81
SPT8YLR055C TY1A-PLP0CX73 440 aa10□□□□□ -0.81
SPT8YLR055C TY1A-JR1P0CX74 440 aa10□□□□□ -0.81
SPT8YLR055C TY1A-LR3P0CX75 440 aa10□□□□□ -0.81
SPT8YLR055C TY1A-ML2P0CX76 440 aa10□□□□□ -0.81
SPT8YLR055C ZRC1P20107 442 aa10□□□□□ -0.81
SPT8YLR055C OAR1P35731 278 aa10□□□□□ -0.81
SPT8YLR055C BET3P36149 193 aa10□□□□□ -0.81
SPT8YLR055C ATP3P38077 311 aaKnown RBP10□□□□□ -0.81
SPT8YLR055C YNR062CP53748 327 aa10□□□□□ -0.81
SPT8YLR055C VBA4Q04602 768 aaKnown RBP10□□□□□ -0.81
SPT8YLR055C ZEO1Q08245 113 aa10□□□□□ -0.81
SPT8YLR055C TY1A-GR1Q12085 440 aa10□□□□□ -0.81
SPT8YLR055C TY1A-PR3Q6Q5H1 440 aaKnown RBP10□□□□□ -0.81
SPT8YLR055C TY1A-OLQ92392 440 aaKnown RBP10□□□□□ -0.81
SPT8YLR055C TIP1P27654 210 aaPredicted RBP9.99□□□□□ -0.81
SPT8YLR055C NAB2P32505 525 aaKnown RBP RIP-Chip data9.99□□□□□ -0.81not detected
SPT8YLR055C SDS24P38314 527 aa9.99□□□□□ -0.81
SPT8YLR055C PRS3P38689 320 aaKnown RBP9.99□□□□□ -0.81
SPT8YLR055C MOG1P47123 218 aa9.99□□□□□ -0.81
SPT8YLR055C OKP1P53298 406 aa9.99□□□□□ -0.81
SPT8YLR055C GIM3P53900 129 aa9.99□□□□□ -0.81
SPT8YLR055C FYV6P53913 173 aa9.99□□□□□ -0.81
SPT8YLR055C BUD25P85052 153 aa9.99□□□□□ -0.81
SPT8YLR055C REC102Q02721 264 aa9.99□□□□□ -0.81
SPT8YLR055C BRX1Q08235 291 aaKnown RBP9.99□□□□□ -0.81
SPT8YLR055C TFC7Q12415 435 aa9.99□□□□□ -0.81
SPT8YLR055C TFB5Q3E7C1 72 aaPredicted RBP9.99□□□□□ -0.81
SPT8YLR055C APA2P22108 325 aa9.98□□□□□ -0.81
SPT8YLR055C PRE2P30656 287 aaKnown RBP9.98□□□□□ -0.81
SPT8YLR055C YOR062CP36025 268 aa9.98□□□□□ -0.81
SPT8YLR055C PAN3P36102 679 aaPredicted RBP9.98□□□□□ -0.81
SPT8YLR055C AUR1P36107 401 aaPredicted RBP9.98□□□□□ -0.81
SPT8YLR055C PUG1P40100 303 aa9.98□□□□□ -0.81
SPT8YLR055C PGD1P40356 397 aa9.98□□□□□ -0.81
SPT8YLR055C SLS1P42900 643 aa9.98□□□□□ -0.81
SPT8YLR055C OTU1P43558 301 aa9.98□□□□□ -0.81
SPT8YLR055C MRX5P47007 382 aa9.98□□□□□ -0.81
SPT8YLR055C TRM9P49957 279 aa9.98□□□□□ -0.81
SPT8YLR055C YMR279CQ03263 540 aa9.98□□□□□ -0.81
SPT8YLR055C INP1Q03694 420 aa9.98□□□□□ -0.81
SPT8YLR055C YIL046W-AQ3E7Z4 54 aa9.98□□□□□ -0.81
SPT8YLR055C TOR1P35169 2470 aa9.98□□□□□ -0.81
SPT8YLR055C CHK1P38147 527 aa9.98□□□□□ -0.81
SPT8YLR055C YGL117WP53133 265 aa9.98□□□□□ -0.81
SPT8YLR055C GLO4Q12320 285 aa9.98□□□□□ -0.81
SPT8YLR055C PBN1P25580 416 aa9.97□□□□□ -0.81
SPT8YLR055C MCM10P32354 571 aa9.97□□□□□ -0.81
SPT8YLR055C RPD3P32561 433 aa9.97□□□□□ -0.81
SPT8YLR055C TIM12P32830 109 aa9.97□□□□□ -0.81
SPT8YLR055C GTT1P40582 234 aa9.97□□□□□ -0.81
SPT8YLR055C SYS1P41544 203 aa9.97□□□□□ -0.81
SPT8YLR055C SPG5P42933 373 aa9.97□□□□□ -0.81
SPT8YLR055C LSM8P47093 109 aaKnown RBP9.97□□□□□ -0.81
SPT8YLR055C BUL1P48524 976 aa9.97□□□□□ -0.81
SPT8YLR055C DGK1Q12382 290 aa9.97□□□□□ -0.81
SPT8YLR055C DFG16Q99234 619 aa9.97□□□□□ -0.81
SPT8YLR055C ODC2Q99297 307 aa9.97□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms