RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	HIS3	P06633	220 aa		4.39	□□□□□ -1.71
CSM2	YIL132C	ERG2	P32352	222 aa		4.39	□□□□□ -1.71
CSM2	YIL132C	MND1	P53102	219 aa		4.39	□□□□□ -1.71
CSM2	YIL132C	PEX31	P53203	462 aa		4.39	□□□□□ -1.71
CSM2	YIL132C	VBA1	Q04301	562 aa		4.39	□□□□□ -1.71
CSM2	YIL132C	TDH1	P00360	332 aa	Known RBP	4.38	□□□□□ -1.71
CSM2	YIL132C	YSR3	P23501	404 aa		4.38	□□□□□ -1.71
CSM2	YIL132C	OST3	P48439	350 aa		4.38	□□□□□ -1.71
CSM2	YIL132C	LOA1	Q06508	300 aa		4.38	□□□□□ -1.71
CSM2	YIL132C	PAN1	P32521	1480 aa		4.37	□□□□□ -1.71
CSM2	YIL132C	RPS3	P05750	240 aa	Known RBP	4.37	□□□□□ -1.71
CSM2	YIL132C	FMP41	P53889	259 aa	Known RBP	4.37	□□□□□ -1.71
CSM2	YIL132C	YNL095C	P53932	642 aa		4.37	□□□□□ -1.71
CSM2	YIL132C	YPL150W	Q12152	901 aa		4.37	□□□□□ -1.71
CSM2	YIL132C	PEX18	P38855	283 aa		4.36	□□□□□ -1.71
CSM2	YIL132C	FMP33	P46998	180 aa		4.36	□□□□□ -1.71
CSM2	YIL132C	SYF2	P53277	215 aa	Predicted RBP	4.36	□□□□□ -1.71
CSM2	YIL132C	SFH1	Q06168	426 aa		4.36	□□□□□ -1.71
CSM2	YIL132C	YAL064W-B	O13512	126 aa		4.35	□□□□□ -1.71
CSM2	YIL132C	CAM1	P29547	415 aa	Known RBP	4.35	□□□□□ -1.71
CSM2	YIL132C	YHI9	P38765	294 aa		4.35	□□□□□ -1.71
CSM2	YIL132C	TRM44	Q02648	567 aa	Known RBP	4.35	□□□□□ -1.71
CSM2	YIL132C	SDC1	Q03323	175 aa		4.35	□□□□□ -1.71
CSM2	YIL132C	SEC10	Q06245	871 aa		4.35	□□□□□ -1.71
CSM2	YIL132C	NUP157	P40064	1391 aa	Known RBP	4.35	□□□□□ -1.71
CSM2	YIL132C	YER188W	P40103	239 aa		4.34	□□□□□ -1.71
CSM2	YIL132C	MRX5	P47007	382 aa		4.34	□□□□□ -1.71
CSM2	YIL132C	LSB1	P53281	241 aa		4.34	□□□□□ -1.71
CSM2	YIL132C	YPL039W	Q03080	316 aa		4.34	□□□□□ -1.71
CSM2	YIL132C	SPP2	Q02521	185 aa		4.33	□□□□□ -1.72
CSM2	YIL132C	PEX3	P28795	441 aa		4.32	□□□□□ -1.72
CSM2	YIL132C	EBP2	P36049	427 aa	Known RBP	4.32	□□□□□ -1.72
CSM2	YIL132C	ATG12	P38316	186 aa		4.32	□□□□□ -1.72
CSM2	YIL132C	PIR5	P46999	287 aa		4.32	□□□□□ -1.72
CSM2	YIL132C	ISD11	Q6Q560	94 aa		4.32	□□□□□ -1.72
CSM2	YIL132C	YEL009C-A	A0A023PZF2	135 aa		4.31	□□□□□ -1.72
CSM2	YIL132C	SSA3	P09435	649 aa	Known RBP	4.31	□□□□□ -1.72
CSM2	YIL132C	HMT1	P38074	348 aa		4.31	□□□□□ -1.72
CSM2	YIL132C	SER33	P40510	469 aa		4.31	□□□□□ -1.72
CSM2	YIL132C	CDC14	Q00684	551 aa		4.31	□□□□□ -1.72
CSM2	YIL132C	FCF1	Q05498	189 aa	Predicted RBP	4.31	□□□□□ -1.72
CSM2	YIL132C	PER33	Q12144	273 aa		4.31	□□□□□ -1.72
CSM2	YIL132C	YBL112C	Q3E7Y4	105 aa		4.31	□□□□□ -1.72
CSM2	YIL132C	YOS9	Q99220	542 aa		4.31	□□□□□ -1.72
CSM2	YIL132C	RRT12	P25381	491 aa		4.3	□□□□□ -1.72
CSM2	YIL132C	POF1	P25576	258 aa		4.3	□□□□□ -1.72
CSM2	YIL132C	CSG2	P35206	410 aa		4.3	□□□□□ -1.72
CSM2	YIL132C	ARN2	P38724	620 aa		4.3	□□□□□ -1.72
CSM2	YIL132C	CDD1	Q06549	142 aa		4.29	□□□□□ -1.72
CSM2	YIL132C	RPP0	P05317	312 aa	Known RBP	4.28	□□□□□ -1.72
CSM2	YIL132C	MED6	P38782	295 aa		4.28	□□□□□ -1.72
CSM2	YIL132C	SSU72	P53538	206 aa	Predicted RBP	4.28	□□□□□ -1.72
CSM2	YIL132C	YOL019W	Q08157	551 aa		4.28	□□□□□ -1.72
CSM2	YIL132C	AGC1	Q12482	902 aa		4.28	□□□□□ -1.72
CSM2	YIL132C	HSM3	P38348	480 aa		4.27	□□□□□ -1.73
CSM2	YIL132C	YJR141W	P47172	347 aa	Predicted RBP	4.27	□□□□□ -1.73
CSM2	YIL132C	ARV1	Q06541	321 aa		4.27	□□□□□ -1.73
CSM2	YIL132C	RPL4A	P10664	362 aa	Known RBP	4.26	□□□□□ -1.73
CSM2	YIL132C	BMH1	P29311	267 aa	Known RBP	4.26	□□□□□ -1.73
CSM2	YIL132C	COY1	P34237	679 aa		4.26	□□□□□ -1.73
CSM2	YIL132C	RPL4B	P49626	362 aa	Known RBP	4.26	□□□□□ -1.73
CSM2	YIL132C	TIM21	P53220	239 aa		4.26	□□□□□ -1.73
CSM2	YIL132C	RGM1	Q00453	211 aa		4.26	□□□□□ -1.73
CSM2	YIL132C	YMR166C	Q03829	368 aa		4.26	□□□□□ -1.73
CSM2	YIL132C	GMC2	Q06201	188 aa		4.26	□□□□□ -1.73
CSM2	YIL132C	AI5_BETA	Q9ZZX0	354 aa		4.26	□□□□□ -1.73
CSM2	YIL132C	TOM40	P23644	387 aa	Known RBP	4.25	□□□□□ -1.73
CSM2	YIL132C	SHC1	P39000	512 aa		4.25	□□□□□ -1.73
CSM2	YIL132C	MNT4	P53745	580 aa		4.25	□□□□□ -1.73
CSM2	YIL132C	MET16	P18408	261 aa	Predicted RBP	4.24	□□□□□ -1.73
CSM2	YIL132C	NPT1	P39683	429 aa	Known RBP	4.24	□□□□□ -1.73
CSM2	YIL132C	SWS2	P53937	143 aa		4.24	□□□□□ -1.73
CSM2	YIL132C	COS2	P0CX12	379 aa		4.23	□□□□□ -1.73
CSM2	YIL132C	COS3	P0CX13	379 aa		4.23	□□□□□ -1.73
CSM2	YIL132C	TAD2	P47058	250 aa		4.23	□□□□□ -1.73
CSM2	YIL132C	NBP35	P52920	328 aa		4.23	□□□□□ -1.73
CSM2	YIL132C	CTS2	Q06350	511 aa		4.23	□□□□□ -1.73
CSM2	YIL132C	ATC1	Q04005	294 aa		4.22	□□□□□ -1.73
CSM2	YIL132C	CTR3	Q06686	241 aa		4.22	□□□□□ -1.73
CSM2	YIL132C	NOT5	Q12514	560 aa	Predicted RBP	4.22	□□□□□ -1.73
CSM2	YIL132C	EMC2	P47133	292 aa	Known RBP	4.21	□□□□□ -1.74
CSM2	YIL132C	KAP114	P53067	1004 aa		4.21	□□□□□ -1.74
CSM2	YIL132C	SSK22	P25390	1331 aa	Predicted RBP	4.21	□□□□□ -1.74
CSM2	YIL132C	SNF6	P18888	332 aa		4.2	□□□□□ -1.74
CSM2	YIL132C	RCY1	P39531	840 aa		4.2	□□□□□ -1.74
CSM2	YIL132C	COA1	P40452	197 aa		4.2	□□□□□ -1.74
CSM2	YIL132C	NIF3	P53081	288 aa		4.2	□□□□□ -1.74
CSM2	YIL132C	RDS3	Q06835	107 aa	Predicted RBP	4.2	□□□□□ -1.74
CSM2	YIL132C	SMT3	Q12306	101 aa	Known RBP	4.2	□□□□□ -1.74
CSM2	YIL132C	SME1	Q12330	94 aa	Predicted RBP	4.2	□□□□□ -1.74
CSM2	YIL132C	RAD10	P06838	210 aa		4.19	□□□□□ -1.74
CSM2	YIL132C	DPM1	P14020	267 aa	Known RBP	4.19	□□□□□ -1.74
CSM2	YIL132C	OM45	P16547	393 aa		4.19	□□□□□ -1.74
CSM2	YIL132C	YHL049C	P38722	271 aa		4.19	□□□□□ -1.74
CSM2	YIL132C	SLX9	P53251	210 aa	Predicted RBP	4.19	□□□□□ -1.74
CSM2	YIL132C	YOR268C	Q08734	132 aa		4.19	□□□□□ -1.74
CSM2	YIL132C	RPL26A	P05743	127 aa	Known RBP	4.18	□□□□□ -1.74
CSM2	YIL132C	CLB6	P32943	380 aa		4.18	□□□□□ -1.74
CSM2	YIL132C	SFC1	P33303	322 aa		4.18	□□□□□ -1.74
CSM2	YIL132C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms