RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W PCL7P40186 285 aa1.99□□□□□ -2.09
RSM28YDR494W PEX31P53203 462 aa1.99□□□□□ -2.09
RSM28YDR494W YNL095CP53932 642 aa1.99□□□□□ -2.09
RSM28YDR494W CDD1Q06549 142 aa1.99□□□□□ -2.09
RSM28YDR494W RPC40P07703 335 aaKnown RBP1.98□□□□□ -2.09
RSM28YDR494W RRT12P25381 491 aa1.98□□□□□ -2.09
RSM28YDR494W CAM1P29547 415 aaKnown RBP1.98□□□□□ -2.09
RSM28YDR494W IBA57P47158 497 aa1.98□□□□□ -2.09
RSM28YDR494W MND1P53102 219 aa1.98□□□□□ -2.09
RSM28YDR494W EGD1Q02642 157 aaKnown RBP1.98□□□□□ -2.09
RSM28YDR494W YEL009C-AA0A023PZF2 135 aa1.97□□□□□ -2.09
RSM28YDR494W TDH1P00360 332 aaKnown RBP1.97□□□□□ -2.09
RSM28YDR494W RPS3P05750 240 aaKnown RBP1.97□□□□□ -2.09
RSM28YDR494W YKL070WP36087 169 aa1.97□□□□□ -2.09
RSM28YDR494W MED6P38782 295 aa1.97□□□□□ -2.09
RSM28YDR494W PIR5P46999 287 aa1.97□□□□□ -2.09
RSM28YDR494W MRX5P47007 382 aa1.97□□□□□ -2.09
RSM28YDR494W OST3P48439 350 aa1.97□□□□□ -2.09
RSM28YDR494W FMP41P53889 259 aaKnown RBP1.97□□□□□ -2.09
RSM28YDR494W RGM1Q00453 211 aa1.97□□□□□ -2.09
RSM28YDR494W YPL039WQ03080 316 aa1.97□□□□□ -2.09
RSM28YDR494W VBA1Q04301 562 aa1.97□□□□□ -2.09
RSM28YDR494W SFH1Q06168 426 aa1.97□□□□□ -2.09
RSM28YDR494W FMP16Q12497 93 aa1.97□□□□□ -2.09
RSM28YDR494W ISD11Q6Q560 94 aa1.97□□□□□ -2.09
RSM28YDR494W YAL064W-BO13512 126 aa1.96□□□□□ -2.1
RSM28YDR494W PEX3P28795 441 aa1.96□□□□□ -2.1
RSM28YDR494W YHI9P38765 294 aa1.96□□□□□ -2.1
RSM28YDR494W RRF1P38771 230 aa1.96□□□□□ -2.1
RSM28YDR494W SSU72P53538 206 aaPredicted RBP1.96□□□□□ -2.1
RSM28YDR494W TRM44Q02648 567 aaKnown RBP1.96□□□□□ -2.1
RSM28YDR494W SEC10Q06245 871 aa1.96□□□□□ -2.1
RSM28YDR494W YOL019WQ08157 551 aa1.96□□□□□ -2.1
RSM28YDR494W PER33Q12144 273 aa1.96□□□□□ -2.1
RSM28YDR494W COY1P34237 679 aa1.95□□□□□ -2.1
RSM28YDR494W ATG12P38316 186 aa1.95□□□□□ -2.1
RSM28YDR494W ARN2P38724 620 aa1.95□□□□□ -2.1
RSM28YDR494W PEX18P38855 283 aa1.95□□□□□ -2.1
RSM28YDR494W FMP33P46998 180 aa1.95□□□□□ -2.1
RSM28YDR494W YJR141WP47172 347 aaPredicted RBP1.95□□□□□ -2.1
RSM28YDR494W ERV25P54837 211 aaKnown RBP1.95□□□□□ -2.1
RSM28YDR494W SPP2Q02521 185 aa1.95□□□□□ -2.1
RSM28YDR494W SDC1Q03323 175 aa1.95□□□□□ -2.1
RSM28YDR494W LOA1Q06508 300 aa1.95□□□□□ -2.1
RSM28YDR494W POF1P25576 258 aa1.94□□□□□ -2.1
RSM28YDR494W BMH1P29311 267 aaKnown RBP1.94□□□□□ -2.1
RSM28YDR494W CSG2P35206 410 aa1.94□□□□□ -2.1
RSM28YDR494W HMT1P38074 348 aa1.94□□□□□ -2.1
RSM28YDR494W TIM21P53220 239 aa1.94□□□□□ -2.1
RSM28YDR494W YMR166CQ03829 368 aa1.94□□□□□ -2.1
RSM28YDR494W FCF1Q05498 189 aaPredicted RBP1.94□□□□□ -2.1
RSM28YDR494W YBL112CQ3E7Y4 105 aa1.94□□□□□ -2.1
RSM28YDR494W YOS9Q99220 542 aa1.94□□□□□ -2.1
RSM28YDR494W SSA3P09435 649 aaKnown RBP1.93□□□□□ -2.1
RSM28YDR494W SNF6P18888 332 aa1.93□□□□□ -2.1
RSM28YDR494W SER33P40510 469 aa1.93□□□□□ -2.1
RSM28YDR494W LSB1P53281 241 aa1.93□□□□□ -2.1
RSM28YDR494W RDS3Q06835 107 aaPredicted RBP1.93□□□□□ -2.1
RSM28YDR494W AGC1Q12482 902 aa1.93□□□□□ -2.1
RSM28YDR494W RPL4AP10664 362 aaKnown RBP1.92□□□□□ -2.1
RSM28YDR494W EBP2P36049 427 aaKnown RBP1.92□□□□□ -2.1
RSM28YDR494W HSM3P38348 480 aa1.92□□□□□ -2.1
RSM28YDR494W SHC1P39000 512 aa1.92□□□□□ -2.1
RSM28YDR494W NPT1P39683 429 aaKnown RBP1.92□□□□□ -2.1
RSM28YDR494W DSK2P48510 373 aa1.92□□□□□ -2.1
RSM28YDR494W RPL4BP49626 362 aaKnown RBP1.92□□□□□ -2.1
RSM28YDR494W NIF3P53081 288 aa1.92□□□□□ -2.1
RSM28YDR494W CDC14Q00684 551 aa1.92□□□□□ -2.1
RSM28YDR494W GRH1Q04410 372 aaKnown RBP1.92□□□□□ -2.1
RSM28YDR494W GMC2Q06201 188 aa1.92□□□□□ -2.1
RSM28YDR494W ARV1Q06541 321 aa1.92□□□□□ -2.1
RSM28YDR494W CTR3Q06686 241 aa1.92□□□□□ -2.1
RSM28YDR494W AI5_BETAQ9ZZX0 354 aa1.92□□□□□ -2.1
RSM28YDR494W SSK22P25390 1331 aaPredicted RBP1.91□□□□□ -2.1
RSM28YDR494W RPP0P05317 312 aaKnown RBP1.91□□□□□ -2.1
RSM28YDR494W RAD10P06838 210 aa1.91□□□□□ -2.1
RSM28YDR494W MET16P18408 261 aaPredicted RBP1.91□□□□□ -2.1
RSM28YDR494W TOM40P23644 387 aaKnown RBP1.91□□□□□ -2.1
RSM28YDR494W SPT8P38915 602 aa1.91□□□□□ -2.1
RSM28YDR494W TAD2P47058 250 aa1.91□□□□□ -2.1
RSM28YDR494W EMC2P47133 292 aaKnown RBP1.91□□□□□ -2.1
RSM28YDR494W SLX9P53251 210 aaPredicted RBP1.91□□□□□ -2.1
RSM28YDR494W CTS2Q06350 511 aa1.91□□□□□ -2.1
RSM28YDR494W DPB2P24482 689 aaPredicted RBP1.9□□□□□ -2.11
RSM28YDR494W CLB6P32943 380 aa1.9□□□□□ -2.11
RSM28YDR494W SFC1P33303 322 aa1.9□□□□□ -2.11
RSM28YDR494W HEK2P38199 381 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
RSM28YDR494W MNN5P46982 586 aa1.9□□□□□ -2.11
RSM28YDR494W MNT4P53745 580 aa1.9□□□□□ -2.11
RSM28YDR494W ATC1Q04005 294 aa1.9□□□□□ -2.11
RSM28YDR494W MYO5Q04439 1219 aaKnown RBP1.9□□□□□ -2.11
RSM28YDR494W PEX10Q05568 337 aa1.9□□□□□ -2.11
RSM28YDR494W SPO77Q06134 477 aa1.9□□□□□ -2.11
RSM28YDR494W PLB3Q08108 686 aa1.9□□□□□ -2.11
RSM28YDR494W STH1P32597 1359 aa1.89□□□□□ -2.11
RSM28YDR494W RPL26AP05743 127 aaKnown RBP1.89□□□□□ -2.11
RSM28YDR494W COS2P0CX12 379 aa1.89□□□□□ -2.11
RSM28YDR494W COS3P0CX13 379 aa1.89□□□□□ -2.11
RSM28YDR494W DPM1P14020 267 aaKnown RBP1.89□□□□□ -2.11
RSM28YDR494W YHL049CP38722 271 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms